Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04312 ATGGTCGTAAGGGACGGTGAGATGAATTGGCAACAAGGGGAGGTAGATTCGTTGCAGAGGGAAGAAGAAGCGATCAAGAATGACGTCAACAATGGCATCCCATCGTCACTTGGAAGACAATCATCCTCGATATACTCACTCACTCTCGACGAGTTCCAGCACTCTCTTTGTGAGAGCGGTAAGAATTTTGGGTCGATGAACATGGATGAGTTCCTCAGTAGTATCTGGAATGCAGAAGAAAATCAACAAGCTGCTTCCAATAATAATAATAACAACAGCAGCAACAATAATAACTTGGCTGTAAATCAGAAAGGGATTGGCACACAGGCTAGTCTTCCTCGACAAAATTCGCTGTCGATTCCAGCACCTCTTTGTAGGAAAACTGTTGAACAGGTTTGGTCTGAGATACACAAAGAACAACACCATCACAATAATAACAATGTGGCCCAGAATACCGAATCTACCCCTCGACAACCGACTTTTGGAGAGATGACATTGGAGGATTTCTTGGTTAAAGCTGGGGTAGTTAGGGAACAACAGTCTGCTATGCCAGTTGCAATAGCACCACCACCTGCAGCAGCAGCATCTCACCGGCCACAGCAGCATTATGCCCCGGTGTATCCAAATAACAACTCCACAATGGCTCAAGCTGCTCCTTTTGCTATTGGTGGTGGCGCTGGGAATGTGGTTGCGCCACCTTACCAAGCGGTGGCTCAGGGAGGTGGGGCAGTTGGAGATCCTTCGGGATATGCTGGAAATGGTAAGAGGGATGGTATAGGTACGGGGTATCCAGCCCCGCCAGGGGTTTGTTATGGAGGAAGAATAGTGAATGGAGGAGCGGGAGGTTATGGCGTCCCAGTGCCACAAACTATGGGAATGGGTGGACCGGTTAGTCCAGTTTCATCCGATGGCATTGGTAACGACAACTCGGGTGGACCATTTGGGCTTGACATGAGTGGTTTAAGAGGAAGGAAGAGGATGGTTGATGGTCCTGTTGAAAGGGTAGTTGAGAGAAGGCAGAGAAGAATGATCAAGAATAGAGAGTCAGCAGCAAGATCAAGAGCCAGAAAACAGGCATACACAGTTGAATTAGAAGCAGAACTGAACCAATTAAGAGAAGAGAATTCTCAACTGAAACAGGCACTGGCCGAACTCGAGAAGAGAAGAAGACAACAGTGTTTAGAGGAAACAAATGTGAGAGTTCAAACTAAAGCTCAGAAGGCAAAAGAAAAACTGAGAGGCTTAAGAAGGAACACAAGTTGTCATCTTTGA 1272 0.467 MVVRDGEMNWQQGEVDSLQREEEAIKNDVNNGIPSSLGRQSSSIYSLTLDEFQHSLCESGKNFGSMNMDEFLSSIWNAEENQQAASNNNNNNSSNNNNLAVNQKGIGTQASLPRQNSLSIPAPLCRKTVEQVWSEIHKEQHHHNNNNVAQNTESTPRQPTFGEMTLEDFLVKAGVVREQQSAMPVAIAPPPAAAASHRPQQHYAPVYPNNNSTMAQAAPFAIGGGAGNVVAPPYQAVAQGGGAVGDPSGYAGNGKRDGIGTGYPAPPGVCYGGRIVNGGAGGYGVPVPQTMGMGGPVSPVSSDGIGNDNSGGPFGLDMSGLRGRKRMVDGPVERVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENSQLKQALAELEKRRRQQCLEETNVRVQTKAQKAKEKLRGLRRNTSCHL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04312 423 Coils Coil 354 418 - -
Trre14g04312 423 Gene3D - 336 392 - -
Trre14g04312 423 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 395 IPR043452 GO:0003700|GO:0045893
Trre14g04312 423 CDD bZIP_plant_BZIP46 343 392 - -
Trre14g04312 423 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 336 392 - -
Trre14g04312 423 SUPERFAMILY Leucine zipper domain 338 388 IPR046347 GO:0003700|GO:0006355
Trre14g04312 423 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 336 388 IPR004827 GO:0003700|GO:0006355
Trre14g04312 423 SMART brlzneu 333 398 IPR004827 GO:0003700|GO:0006355
Trre14g04312 423 MobiDBLite consensus disorder prediction 82 101 - -
Trre14g04312 423 Pfam bZIP transcription factor 338 390 IPR004827 GO:0003700|GO:0006355
Trre14g04312 423 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 341 356 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04312 Trre-Chr14 51597452 51599023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04312 1 393 bZIP Transcription Factor Family AT2G36270 49.887 5.34e-112 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre14g04312 bZIP_1 2.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04312 K14432 - gmx:100790948 451.055