Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04298 ATGCTTGCTGATCAATTAATTAACAGAGTTGAATTTATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAACCATACAATTTTTTAATGGGCCTAGGACTTCTTCATACTGATAGCCACAGACCATACCGGGAAAACAAGAACCTTACAGGGACAGCTCGATATGCGAGTTTAAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTAGAATCTCTTGGTTATGTTCTTATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAGGCGGACACGAAACAACAAAAATATGATAATATCGCCAAGAAGAAGATGAAAACTTCCATAGAGGTTCTCTGCGGATCATATCCTCCGGAGTTTGCATTATACTTTCACTACTGCCGATCATTGCAGTTTGAAGACAAGCCCGACTATTCACGTTTGAAAAGGCTTTTTAAAGCTCTATTTATTCGAGAAGGTTATGAATTTGACCATGTTTTTGACTGGACTTTATTGAGGGGCAATCTGGCCGGCTGA 528 0.3996 MLADQLINRVEFMHSRGFLHRDIKPYNFLMGLGLLHTDSHRPYRENKNLTGTARYASLNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKADTKQQKYDNIAKKKMKTSIEVLCGSYPPEFALYFHYCRSLQFEDKPDYSRLKRLFKALFIREGYEFDHVFDWTLLRGNLAG 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04298 175 SUPERFAMILY Protein kinase-like (PK-like) 2 166 IPR011009 -
Trre14g04298 175 Gene3D Transferase(Phosphotransferase) domain 1 1 173 - -
Trre14g04298 175 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04298 175 Pfam Protein kinase domain 3 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04298 175 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Trre14g04298 175 PANTHER CASEIN KINASE-RELATED 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04298 Trre-Chr14 51446203 51448170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04298 2 145 MAP Kinase Kinase Kinase AT1G62400 27.742 5.75e-09 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Trre14g04298 Pkinase 1.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04298 K08960 - sspl:121808636 291.197