Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04295 ATGACACGTGTCACTCATTCACACCCTTCTTCTGCTATGATGATGCCAATGCTTCCTTTCCCAACCACTGTGATGATGACTAATGGCCAAGCTGTTGCAGAGCAGCTAGATGATAAAATATCCAATACTACATCCCTTAAAACAGAAAGGACTCGGGAGAATGACTGCTTAAGAAACATGAAGGTGGAGCAGGATGCTGATTTACCTAAGACTACTCACTGTAATAAGTCAAGACGTAATTTAACCGAGGAAGAAAAAGAAACACGGAGGATACGAAGGGTATTGGCAAATAGAGAGTCCGCTAGGCAGACAATTCGCCGCAGGCAGGCTCTGACTGAGGAGTTAAACAGAAAAGCTGCGACCTTAGAGATGGAAAATGAAAACCTGAAGAGGAAGGAGTTGGCTTTGAAAGAGTATCAGTCTTTAGAGACTACAAATAAGCTCTTAAAAGCACAAGTAACTAAGTCAATAAACACAAAAGTGGAAAAATCTCCTGTTGAGCAGGAGTTATCTGTGGCTGAGGCAGCACCTATGCCTGGTAATAGTCCATGGTTTCTTTATAACCATTTTCCGGTTAGACAGCTATTTTGGCCCGCCATTTTTCAATCTTCTAAACAAGTTCAGTTACAACATACACCATTTAATTCCATTGCCATTCCATCACATGTATATGTACCATGTCCTTCTGAGTCTGAATCTCCTCACAAGCAAAATAGCTTTGTAAATGACAATCAAACACAAAATCCATTGTACATGTTTCCATGTCCTTGGTTATACCCTCCTCCAGGAGTTGGAAATGGAGAACCACCACCTTCCAGTAGCCTAGAAGATAAACAAGATAATCTTCCTCCTGGTGAACAATGTAGTACTAGTTTATCCTTAAATAGTGTGGGAAATGGGGATTATCATGCAACTCTACCTATCAAACTGAAAACAGAAGCTTCTGACTGGACAGAATCCAGATCTAGTAATGACCCTGACCATGCCACTCCAAGTTTTTCTTTGGATGGAGGTGAGCAGAAAACAAGATGTCCCATAGAAATGTTCCATGGACCTGCAGTTGATTGCAATGGACATGCTTATGTAGTCAAGCAAGAACCTGAGCTTCAATTACATTCCGCTTCCGATACCAACATATCTTCAACAGCTTCTCATATCAAACCTTATTCACTGGAAAAGAAACAAGAACAGTTCATATGCCCAGGTAAAAATCTAGTGGATGCAGTTGCTGCGGCCGAGGCACGAAAGAGGAGAAAGGAGCTGACAAAACTAAAAAGCAATCAAAGCCGCCAGTTCCGGATGGAGTGTTGA 1311 0.4172 MTRVTHSHPSSAMMMPMLPFPTTVMMTNGQAVAEQLDDKISNTTSLKTERTRENDCLRNMKVEQDADLPKTTHCNKSRRNLTEEEKETRRIRRVLANRESARQTIRRRQALTEELNRKAATLEMENENLKRKELALKEYQSLETTNKLLKAQVTKSINTKVEKSPVEQELSVAEAAPMPGNSPWFLYNHFPVRQLFWPAIFQSSKQVQLQHTPFNSIAIPSHVYVPCPSESESPHKQNSFVNDNQTQNPLYMFPCPWLYPPPGVGNGEPPPSSSLEDKQDNLPPGEQCSTSLSLNSVGNGDYHATLPIKLKTEASDWTESRSSNDPDHATPSFSLDGGEQKTRCPIEMFHGPAVDCNGHAYVVKQEPELQLHSASDTNISSTASHIKPYSLEKKQEQFICPGKNLVDAVAAAEARKRRKELTKLKSNQSRQFRMEC 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04295 436 PANTHER G-BOX-BINDING FACTOR 3-RELATED 15 220 IPR044827 GO:0003700|GO:0006355|GO:0043565
Trre14g04295 436 Coils Coil 108 152 - -
Trre14g04295 436 CDD bZIP_plant_GBF1 90 140 IPR045314 GO:0003700|GO:0006355
Trre14g04295 436 Coils Coil 411 431 - -
Trre14g04295 436 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 149 IPR004827 GO:0003700|GO:0006355
Trre14g04295 436 MobiDBLite consensus disorder prediction 272 296 - -
Trre14g04295 436 MobiDBLite consensus disorder prediction 262 296 - -
Trre14g04295 436 SMART brlzneu 85 148 IPR004827 GO:0003700|GO:0006355
Trre14g04295 436 MobiDBLite consensus disorder prediction 315 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04295 Trre-Chr14 51432099 51435525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04295 70 436 bZIP Transcription Factor Family AT1G19490 33.947 1.56e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04295 - - gmx:100788624 501.13