Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04294 ATGACACGTGTCACTCATTCACACCCTTCTTCTGCTATGATGATGCCAATGCTTCCTTTCCCAACCACTGTGATGATGACTAATGGCCAAGCTGTTGCAGAGCAGCTAGATGATAAAATATCCAATACTACATCCCTTAAAACAGAAAGGACTCGGGAGAATGACTGCTTAAGAAACATGAAGGTGGAGCAGGATGCTGATTTACCTAAGACTACTCACTGTAATAAGTCAAGACGTAATTTAACCGAGGAAGAAAAAGAAACACGGAGGATACGAAGGGTATTGGCAAATAGAGAGTCCGCTAGGCAGACAATTCGCCGCAGGCAGGCTCTGACTGAGGAGTTAAACAGAAAAGCTGCGACCTTAGAGATGGAAAATGAAAACCTGAAGAGGAAGAAGGAGTTGGCTTTGAAAGAGTATCAGTCTTTAGAGACTACAAATAAGCTCTTAAAAGCACAAGTAACTAAGTCAATAAACACAAAAGTGGAAAAATCTCCTGTTGAGCAGGAGTTATCTGTGGCTGAGGCAGCACCTATGCCTGGTAATAGTCCATGGTTTCTTTATAACCATTTTCCGGTTAGACAGCTATTTTGGCCCGCCATTTTTCAATCTTCTAAACAAGTTCAGTTACAACATACACCATTTAATTCCATTGCCATTCCATCACATGTATATGTACCATGTCCTTCTGAGTCTGAATCTCCTCACAAGCAAAATAGCTTTGTAAATGACAATCAAACACAAAATCCATTGTACATGTTTCCATGTCCTTGGTTATACCCTCCTCCAGGAGTTGGAAATGGAGAACCACCACCTTCCAGTAGCCTAGAAGATAAACAAGATAATCTTCCTCCTGGTGAACAATGTAGTACTAGTTTATCCTTAAATAGTGTGGGAAATGGGGATTATCATGCAACTCTACCTATCAAACTGAAAACAGAAGCTTCTGACTGGACAGAATCCAGATCTAGTAATGACCCTGACCATGCCACTCCAAGTTTTTCTTTGGATGGAGGTGAGCAGAAAACAAGATGTCCCATAGAAATGTTCCATGGACCTGCAGTTGATTGCAATGGACATGCTTATGTAGTCAAGCAAGAACCTGAGCTTCAATTACATTCCGCTTCCGATACCAACATATCTTCAACAGCTTCTCATATCAAACCTTATTCACTGGAAAAGAAACAAGAACAGTTCATATGCCCAGGTAAAAATCTAGTGGATGCAGTTGCTGCGGCCGAGGCACGAAAGAGGAGAAAGGAGCTGACAAAACTAAAAAGCAATCAAAGCCGCCAGTTCCGGATGGAGTGTTGA 1314 0.417 MTRVTHSHPSSAMMMPMLPFPTTVMMTNGQAVAEQLDDKISNTTSLKTERTRENDCLRNMKVEQDADLPKTTHCNKSRRNLTEEEKETRRIRRVLANRESARQTIRRRQALTEELNRKAATLEMENENLKRKKELALKEYQSLETTNKLLKAQVTKSINTKVEKSPVEQELSVAEAAPMPGNSPWFLYNHFPVRQLFWPAIFQSSKQVQLQHTPFNSIAIPSHVYVPCPSESESPHKQNSFVNDNQTQNPLYMFPCPWLYPPPGVGNGEPPPSSSLEDKQDNLPPGEQCSTSLSLNSVGNGDYHATLPIKLKTEASDWTESRSSNDPDHATPSFSLDGGEQKTRCPIEMFHGPAVDCNGHAYVVKQEPELQLHSASDTNISSTASHIKPYSLEKKQEQFICPGKNLVDAVAAAEARKRRKELTKLKSNQSRQFRMEC 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04294 437 CDD bZIP_plant_GBF1 90 141 IPR045314 GO:0003700|GO:0006355
Trre14g04294 437 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Trre14g04294 437 MobiDBLite consensus disorder prediction 273 297 - -
Trre14g04294 437 Coils Coil 108 153 - -
Trre14g04294 437 MobiDBLite consensus disorder prediction 263 297 - -
Trre14g04294 437 MobiDBLite consensus disorder prediction 316 340 - -
Trre14g04294 437 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 150 IPR004827 GO:0003700|GO:0006355
Trre14g04294 437 SUPERFAMILY Leucine zipper domain 89 144 IPR046347 GO:0003700|GO:0006355
Trre14g04294 437 PANTHER G-BOX-BINDING FACTOR 3-RELATED 15 221 IPR044827 GO:0003700|GO:0006355|GO:0043565
Trre14g04294 437 Pfam bZIP transcription factor 85 147 IPR004827 GO:0003700|GO:0006355
Trre14g04294 437 Coils Coil 412 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04294 Trre-Chr14 51432099 51435525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04294 70 437 bZIP Transcription Factor Family AT1G19490 33.947 2.97e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre14g04294 bZIP_1 5.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04294 - - gmx:100788624 506.138