Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04269 ATGGAAGACCATAATCATCATCATCATCGTCAACATCACCATGAACAGCATCAACAACAACAACAACACTATGTTAATGTTACTAGTAACACTAACAGTATCACTGATTTCAGACAACTCATGAATATTGGACAAAGAACAACATCAACAACAACAACAGCAACAGATCATTTTCCTACGGCGGAGTTATTCCCCTCCGCCGGCAACAACCCAAATCTGACAGTGACACCAACACATCAACAACACTATGAGATGATCATGTTTGGTCGCCAAGTATCTGATATAATGCCTCGCTCATTTCATGACTTTGTTTCAACAGATTCTGCTGCTGCTATTGCCACCGCCACCACTACAACTAGTGCTTCAACTCCTACTCTTAGTGGTAATTTAGAACCCGAAACAACAACAACAACCGGTTGCTTAGGTATTGTTGATGCTTCAAATGGAAGATGGCCTAGACAAGAAACTCTTACTCTTCTTGAGATTAGATCTCGTCTTGATCCTCAATTCAAAGAAGCTACTCATAAGGGTCCTCTTTGGGATCAACTTTCTAGGATAATGTGTGAAGAACATGGATATCAAAGGAGTGGGAAAAAATGCAGGGAGAAGTTTGAGAATCTATACAAATACTACAAGAAAACAAAAGAAGGAAAAGCAGGAAGACAAGATGGAAAACATTATAGATTCTTTCGTCAACTTGAAGCCTTATATGGTCAAAACAATAACCCCTCTTCATCTTCACTCCCAGAAAACAATTTTTGTTCCAACAACAATCAAGATATGTTTCATTCTCAAAACAAACATTGTGATAGCCTCAGCCTCACAAACTCAACTGAATTTGACACATCGTCGTCCGATAACGATGATCGTAATAATGAAAGCTCCATGGAGAAAAGAAAAAAGAAGATGAGTGGAAGAAGCTTCTGGAAGGTAAAGATAAAAGACTTCATTGATTCACAAATGAAGAAGTTGGTGGTGAAACAAGAGGAATGGTTGGAGAAACTCACAAAAACATTGGAACAAAAGGAAAAGGAAAGAGTGTTAAGAGAAGAAGAATGGAGGAAACAAGAGAAAGAACGGTTAGAAAAAGAGCACAAATTTTGGGCTAAAGAAAGAGCATGGATTGAAGCAAGGGATGCTGCTTTAATGGAGGCTTTGCATAAATTTAAAGGAAATGATGAGATAATAAATACTCAATCTTCTTCTCATGATGTCAACAAAAAAAGAAAAGAAAACTCAAGAAGTTGTTTTTACTTTGATAATAACAACAATGTTGATAGGTCTTGTTTGTATAATAACAATGGAGGAGGTTCTTATTGTGGTGATGTTAATGATCAAAGGGAAGAACTTGGGAGAGTAGTAAGAAATGATGGTTCAAATTCTAGTAATGTTATTGTTGCAGCTGAAAATTGTTTTCCATTGTTGATGAGTGATGGAGGAAATTTGTGGGAGAATTACAGCTTAAAGGTTAGTAAAGCAAATCAAAACCAGTGA 1494 0.3688 MEDHNHHHHRQHHHEQHQQQQQHYVNVTSNTNSITDFRQLMNIGQRTTSTTTTATDHFPTAELFPSAGNNPNLTVTPTHQQHYEMIMFGRQVSDIMPRSFHDFVSTDSAAAIATATTTTSASTPTLSGNLEPETTTTTGCLGIVDASNGRWPRQETLTLLEIRSRLDPQFKEATHKGPLWDQLSRIMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGQNNNPSSSSLPENNFCSNNNQDMFHSQNKHCDSLSLTNSTEFDTSSSDNDDRNNESSMEKRKKKMSGRSFWKVKIKDFIDSQMKKLVVKQEEWLEKLTKTLEQKEKERVLREEEWRKQEKERLEKEHKFWAKERAWIEARDAALMEALHKFKGNDEIINTQSSSHDVNKKRKENSRSCFYFDNNNNVDRSCLYNNNGGGSYCGDVNDQREELGRVVRNDGSNSSNVIVAAENCFPLLMSDGGNLWENYSLKVSKANQNQ 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04269 497 MobiDBLite consensus disorder prediction 277 301 - -
Trre14g04269 497 MobiDBLite consensus disorder prediction 283 301 - -
Trre14g04269 497 MobiDBLite consensus disorder prediction 240 259 - -
Trre14g04269 497 Pfam Myb/SANT-like DNA-binding domain 150 236 IPR044822 -
Trre14g04269 497 Coils Coil 325 352 - -
Trre14g04269 497 CDD GT1 150 215 - -
Trre14g04269 497 ProSiteProfiles Myb-like domain profile. 143 208 IPR001005 -
Trre14g04269 497 MobiDBLite consensus disorder prediction 1 23 - -
Trre14g04269 497 FunFam trihelix transcription factor PTL-like 151 213 - -
Trre14g04269 497 Gene3D - 151 213 - -
Trre14g04269 497 PANTHER FI21293P1 117 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04269 Trre-Chr14 51189749 51192168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04269 405 492 Trihelix Transcription Factor Family AT5G03680 37.374 1.80e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre14g04269 Myb_DNA-bind_4 4.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04269 - - psat:127125684 680.248