Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04244 ATGGCATCTCTTATAATTTTTCTACTCTTATCTTTTCCTATATTCCTCTTCCTCCTCAACCGCCGTAGAAATATCTCGGCCGCCAAGCGCCGTCTTCCACCCGGACCACCGGGATGGCCCATAATTGGAAATATGTTCCAATTAGGAGAAATGCCTCATCGCACACTCACAAATTTAAGAGAAAAATATGGTCCAATTTTATGGCTCAAAATAGGTTCAATAAACACTATGGCAATACTCTCGGCCAAAGAAGCTACAACATTTTTCAAAAACCATGACCAAAATTTTTCGGACCGAACCGTAATCGAGACCATGCGTGTCCATGATTACAACAAATCTTCCTTAGCTTTGGCTCCTTACGGCCCTTATTGGCGGCTCATGCGCCGACTTGTAACCGTCGATATGTTAGTTATGAAACGCATAAACGACACCATTTCGGTTCGTCGTAAATGCGTAAATGACATGCTGACGTGGATTAACAAAGAAGCATGTGAGTTGGAAAATGGTCGTGGACTTCATGTTTCACGTTTTATTTTCTTCATGAGTTTTAATTTGTTTGGGAATTTAATGTTGTCACGTGATTTGTTTAATATGGAATCTGAGAATAGGTCTGAATTTTTTGATGCTGTTATGGGGATGATGGAGTGGACCGGACATGCTAATGTGTCTGATTTGTTTCCTTGGTTGAGGTGGTTGGACCCACAAGGACTAAGGAGAAAAATGGATAGGGATATGGGAAAAGCGATTAAATTTGCTTCCACGTTTGTGAAAGAGCGTTTGGAGGTGGAACGTGATGATGAGAAATCAAGGGATTTCTTGGATGTCTTACTTGATTTCCAAAAAAATGAGAACCGGGAAGCAGCTAAGATCTCAGATAAAGATCTCAACATTTTGATCTTGGAAATGTTTCTAGCTGGGGCAGAAACAACGAGCAGCACAATTGAATGGGCTATGACAGAGCTTTTAATCAACCCTGATTCTGGAAGAAGAATGTGTGCTGGTGTGCCTTTGGCACATAGAATTCTTCACCTTGTTTTGGGATCATTAATTCATCGATTTGATTGGGAGCTTGATAGCAATGTTACACCTTTAACTATGGACATGAGAGATAATCTTGGGATTACCATGAGAAAGTTTGAACCATTGCTTGCTGTACCCAAATTAGTTGTTGGTTCTTAG 1179 0.4063 MASLIIFLLLSFPIFLFLLNRRRNISAAKRRLPPGPPGWPIIGNMFQLGEMPHRTLTNLREKYGPILWLKIGSINTMAILSAKEATTFFKNHDQNFSDRTVIETMRVHDYNKSSLALAPYGPYWRLMRRLVTVDMLVMKRINDTISVRRKCVNDMLTWINKEACELENGRGLHVSRFIFFMSFNLFGNLMLSRDLFNMESENRSEFFDAVMGMMEWTGHANVSDLFPWLRWLDPQGLRRKMDRDMGKAIKFASTFVKERLEVERDDEKSRDFLDVLLDFQKNENREAAKISDKDLNILILEMFLAGAETTSSTIEWAMTELLINPDSGRRMCAGVPLAHRILHLVLGSLIHRFDWELDSNVTPLTMDMRDNLGITMRKFEPLLAVPKLVVGS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04244 392 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g04244 392 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g04244 392 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g04244 392 SUPERFAMILY Cytochrome P450 27 385 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g04244 392 Gene3D Cytochrome P450 327 383 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g04244 392 Pfam Cytochrome P450 33 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g04244 392 Pfam Cytochrome P450 328 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g04244 392 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 327 387 - -
Trre14g04244 392 Gene3D Cytochrome P450 18 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04244 Trre-Chr14 50977727 50980119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04244 327 386 Cytochrome P450 AT3G52970 48.333 7.18e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04244 K22983 - gmx:100785241 487.648