Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04240 ATGGAATCCAATGGAATATTTCCTACCATTAATAATGGATTTCTAGGAGTAGAAAACCCTTCAAAACAACAACAAAACCTTCAAAATCAACAAAATCCTCACAATTTACAACATCACCAAATGGTTTCCTATGATCAACAACCTCATCAATCAATAAAACAAGGCTACCCTTATACATCAAAAACCAACAACAACAAACCACAACAACAAATCAACCTTAGCGACGAAGACGAACCGTGTTTCGGAGCAGATGAAACCTCTATTGGTGACCCAAAAAGAAAAGGATCACCATGGCATAGAATGAAATGGACAGATACAATGGTAAGACTTTTAATAATGGCTGTTTATTACATTGGTGATGAAGCTGGTACTTCAGAATTAGGAATAGGCACTGATAATAATAAAAAGAAAACAAATGGTTTGTTACAAAAGAAAGGTAAATGGAAATCAGTTTCTAAAGGAATGATGGAAAAAGGTTACTATGTTTCACCTCAACAATGTGAAGATAAGTTCAATGATTTGAACAAAAGATATAAAAGAGTGAATGATATTCTTGGTAAAGGAACAGCTTGTAGAGTTGTTGAAAATCAAAGTTTGTTAGATACTATGGATTTGTCTATAAAATTGAAAGATGAAGCTAGAAAGCTTTTGAATTCAAAGCATCTTTTCTTTAGAGAAATGTGTGCTTATCATAATAGTTGTGGACATGTAAACAATAACAATAACAATTTGCAACAACAAACTTCAAATGAGACACAACCACAACAACAACATCAACAACAGCAGCAACAAAACCAACAACAATGTTTACATTCATCAAATGGGGTAGGAATGTTGAAGTTGAAAGGAAAAAGTGGAGAAGAGGAAGAAGATGAAGATGAAGAAGATGAATGGGAAGATGAATCTGAAGAGGAAGAAGAAGAATCAGGAGATCAAGGTGGTTGTTATGGATCAAAGGGTAATGAAGAAGATGAGAATATTAATATTAATATTGATCATCATTTGAGGAAAAAATCAAAGAAAGTTTCATCACAAGTTATGCAACAGTTGAATAGTGAGGTGATGAATGTGTTGCAAGATGGAGTGAAGAGTAGTTGGGAGAAAAAACAATGGATGAAGAAAAGGGTGGTGCAATTAGCAGAAGAACAAATAAACTATCATGTTGAAGCATTTGAGATTGAAAAACAAAGGTTAAAATGGGCAAAGTTTAGTGGTAATAAAGAAAGGGAAATGGAGAAAAATAAACTTGAAAATGAAAGGAGGAGTTTGGAAATTGATAGAATGGTTTTGTTGCTTAGACAAAAGGAGCTTGAGTTGCAGAATACTCAGCAGATGCAACAGCAGCAACATTCTTCTACTTAG 1362 0.3363 MESNGIFPTINNGFLGVENPSKQQQNLQNQQNPHNLQHHQMVSYDQQPHQSIKQGYPYTSKTNNNKPQQQINLSDEDEPCFGADETSIGDPKRKGSPWHRMKWTDTMVRLLIMAVYYIGDEAGTSELGIGTDNNKKKTNGLLQKKGKWKSVSKGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLDTMDLSIKLKDEARKLLNSKHLFFREMCAYHNSCGHVNNNNNNLQQQTSNETQPQQQHQQQQQQNQQQCLHSSNGVGMLKLKGKSGEEEEDEDEEDEWEDESEEEEEESGDQGGCYGSKGNEEDENININIDHHLRKKSKKVSSQVMQQLNSEVMNVLQDGVKSSWEKKQWMKKRVVQLAEEQINYHVEAFEIEKQRLKWAKFSGNKEREMEKNKLENERRSLEIDRMVLLLRQKELELQNTQQMQQQQHSST 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04240 453 Coils Coil 288 308 - -
Trre14g04240 453 MobiDBLite consensus disorder prediction 1 79 - -
Trre14g04240 453 Coils Coil 406 433 - -
Trre14g04240 453 MobiDBLite consensus disorder prediction 1 75 - -
Trre14g04240 453 Gene3D - 103 180 - -
Trre14g04240 453 MobiDBLite consensus disorder prediction 288 311 - -
Trre14g04240 453 MobiDBLite consensus disorder prediction 239 324 - -
Trre14g04240 453 Pfam Myb/SANT-like DNA-binding domain 100 229 IPR044822 -
Trre14g04240 453 MobiDBLite consensus disorder prediction 239 274 - -
Trre14g04240 453 PANTHER F16F4.11 PROTEIN-RELATED 6 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04240 Trre-Chr14 50942524 50943885 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre14g04240 Myb_DNA-bind_4 7.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04240 - - gmx:100808934 499.975