Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04221 ATGTTGAGTTTATGCATTGATGTTTTTGCACTGCCACAGGGTTTTGGAATGGGGGCACTATTATTGATTCTATTTAGCACCTATGGACTTGCAATGTGGTATGGTTCCAAATTAGTCATTGAGAAAGGATATACTGGTGGAACTGTCATGAGTGTAATCATATCTCTTATGACTAGTGGAGTCTTTTATGTCAATTCTCCACATGTATGA 210 0.3762 MLSLCIDVFALPQGFGMGALLLILFSTYGLAMWYGSKLVIEKGYTGGTVMSVIISLMTSGVFYVNSPHV 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04221 69 Gene3D ABC transporter type 1, transmembrane domain 9 66 IPR036640 GO:0005524|GO:0016020
Trre14g04221 69 PANTHER ABC TRANSPORTER B FAMILY 12 61 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04221 Trre-Chr14 50796929 50798068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04221 10 61 Calmodulin-binding Proteins AT2G36910 32.692 2.30e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04221 K05658 - gmx:100801771 80.4925