Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04211 ATGGACACAGTGTTGGTACCTCCTTGGTTAGAATCATTGTTGAAAACACCGTTTTTCAATATGTGTCGGATTCACGCTGACGCAGCTAGAAATGAGTGTAACATGTATTGTTTAGATTGCAACAATGGTGACGGTGCTTTTTGTTTTTACTGCCGTTCTTCAAGACACAAAGATCACCAAGTCATTCAGATAAGAAGATCTTCGTATCATGATGTTGTGAGAGTATCAGAGATTCAGAAAGTGTTGGATATAAGTGGAGTACAAACATATGTGATAAACAGTGCTAGAGTATTGTTCTTGAATGTGAGGCCACAACCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGGAGTTTATTAGATTCATTTCGGTTCTGTTCTTTGGGATGTAAGCTTGAAAGAATAAAGAAAAATGGAGATGCAAGTTTTGCTTTAGAGGGTATGAGTGAAGCATTGACAATGGAAGGGGTGTCAAGTAGTAGATCAGAAGAAGAATTGCGTGAAGGCTCAACACAAGATATGTATCCGGTCACGCCTCCTCCACCTCCTTTAAATTCAAGGAGAAGAAAAGGTATTCCTCACAGGGCACCTTTTGGTTCCTCATTCTAA 621 0.3961 MDTVLVPPWLESLLKTPFFNMCRIHADAARNECNMYCLDCNNGDGAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDSFRFCSLGCKLERIKKNGDASFALEGMSEALTMEGVSSSRSEEELREGSTQDMYPVTPPPPPLNSRRRKGIPHRAPFGSSF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04211 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 202 - -
Trre14g04211 206 SUPERFAMILY B-box zinc-binding domain 19 66 - -
Trre14g04211 206 MobiDBLite consensus disorder prediction 160 206 - -
Trre14g04211 206 Pfam PLATZ transcription factor 65 136 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04211 Trre-Chr14 50726519 50728700 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre14g04211 PLATZ 8.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04211 - - psat:127125735 379.022