Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04174 ATGAGAATTATTTGGAACCGGGTGGTACATCCGGTTGGGTTTGAAAACGAAGTGGGGGGTCGGGTCAGCGTTCGTTCCGTTCCCCAAATAAAAGTGAGACAGAGGCTTGAAATCGGAAATAGAACCGGCGAGCGGAGGAATAACAACAATAACAGCGAAGAGGAAGAGATGGCTCGGAGTATCTCGTATGTGACAGGGACGCAGCTTCTGTCTCTAAAACGGCAACCAACCATCGACATCGTGGATGTGAGAGACGACGAGAGGAGTCACGATGGTCACATATCTGGTTCTCTTCATTACGCAAGCGACGGTTTCTCTCAAAACATCTCTAAACTCCTTCAAGATGTTAAAGGCAAAGATACCCTCGTCTTTCACTGCGCTCTAAGTCAGGTTCGAGGCCCAAGTTGTGCTAGGAAGCTTGTCAATTATCTTGAAGAGAGCAAGGAAGACGTTGGGATAAAGAACATCATGGTCTTAGAACGTGGCTTCAATGGGTGGGAAGCTTCTGGTAGACCTGTTTGCCGCTGCAATAATGTTCCTTGCAAGGAACATGAGAGTGCTTAA 564 0.4752 MRIIWNRVVHPVGFENEVGGRVSVRSVPQIKVRQRLEIGNRTGERRNNNNNSEEEEMARSISYVTGTQLLSLKRQPTIDIVDVRDDERSHDGHISGSLHYASDGFSQNISKLLQDVKGKDTLVFHCALSQVRGPSCARKLVNYLEESKEDVGIKNIMVLERGFNGWEASGRPVCRCNNVPCKEHESA 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04174 187 FunFam Dual-specificity phosphatase CDC25 57 186 - -
Trre14g04174 187 SMART rhod_4 64 172 IPR001763 -
Trre14g04174 187 Gene3D - 56 186 IPR036873 -
Trre14g04174 187 PANTHER M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 41 180 - -
Trre14g04174 187 MobiDBLite consensus disorder prediction 38 53 - -
Trre14g04174 187 ProSiteProfiles Rhodanese domain profile. 74 175 IPR001763 -
Trre14g04174 187 Pfam Rhodanese-like domain 68 168 IPR001763 -
Trre14g04174 187 MobiDBLite consensus disorder prediction 38 57 - -
Trre14g04174 187 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 57 183 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04174 Trre-Chr14 50339703 50342295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04174 53 131 Sulfurtransferasese or Rhodanese AT5G03455 68.354 3.50e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04174 K18065 - gmx:100305790 226.098