Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04155 ATGGATGTTGTTTTAGTTAACGGTACTCTTTGCGAAGGAGATCGAATAGCTGGGCAAATTGTTACCTCAATTCAATCTTTATGGATACCTTGTCCAATGGGAGAACTTGGTGTTGAGTATCTCAAATACAAAAAAATCAAAGCTGTGATGGGTATCAAGATCTTTGCTCAGGGGATTGAAGATGCTATTCTTGGAAGTACTTTGTATCTAGTGAAGCCTAGTGATGATTCCAAAGATATTGAAGAACCAATCTTGGAAGATAAGAAACGACACGATTGA 279 0.3763 MDVVLVNGTLCEGDRIAGQIVTSIQSLWIPCPMGELGVEYLKYKKIKAVMGIKIFAQGIEDAILGSTLYLVKPSDDSKDIEEPILEDKKRHD 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04155 92 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 2 89 IPR015760 -
Trre14g04155 92 Gene3D Translation factors 1 92 - -
Trre14g04155 92 SUPERFAMILY Translation proteins 2 71 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04155 Trre-Chr14 50163715 50165203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04155 1 87 Eukaryotic Initiation Factors Gene Family AT1G76810 54.255 8.24e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04155 K03243 - sly:101255564 94.3597