Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04154 ATGGATGTTGTTTTAGTTAACGGTACTCTTTGCGAAGGAGATCGAATAGCTGTATGTGGAAGGAAGGGGCAAATTGTTACCTCAATTCAATCTTTATGGATACCTTGTCCAATGGGAGAACTTGGTGTTGAGTATCTCAAATACAAAAAAATCAAAGCTGTGATGGGTATCAAGATCTTTGCTCAGGGGATTGAAGATGCTATTCTTGGAAGTACTTTGTATCTAGTGAAGCCTAGTGATGATTCCAAAGATATTGAAGAACCAATCTTGGAAGATAAGAAACGACACGATTGA 294 0.381 MDVVLVNGTLCEGDRIAVCGRKGQIVTSIQSLWIPCPMGELGVEYLKYKKIKAVMGIKIFAQGIEDAILGSTLYLVKPSDDSKDIEEPILEDKKRHD 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04154 97 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 2 94 IPR015760 -
Trre14g04154 97 Gene3D Translation factors 1 97 - -
Trre14g04154 97 SUPERFAMILY Translation proteins 2 76 IPR009000 -
Trre14g04154 97 Pfam Elongation factor Tu domain 2 2 74 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04154 Trre-Chr14 50163715 50165203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04154 1 92 Eukaryotic Initiation Factors Gene Family AT1G76810 57.447 2.11e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04154 K03243 - sly:101255564 107.842