Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04153 ATGGAAGGTAAAAAAGATGAAGATTTTGAGGCTTTATCTGCGTCATTCTTGGATGTTGATGATGAGATTAATAATCTCTCCGTTGCTGCTGAAAAGGAGGATGTGATTCTCCTCCGTTTCCCAATTTGTTGTGTGATCGGACACTCATACATTGGAAAAACCAAGCTGCTGAATTATATTCGAGGTGCCGCCGATTTTGAATTTGAAGATAATACCACAACAAAACGTATCACCGCTACATACCAGTCTACGTATACTCAAAATGCATTTAATGTGAAGCTCACAAAGATTATCACCCAATTCAAAGAACATGGGTTAAGTACAGAGATATATTGGCGAAACAAAGAAATGGGAGAAACGGTCAGCATTGTGCCTACAAGTGCAAGCAGTGGTGAAGGAATCCCAGATTTGTTATTACTACTGGCTATGTGGCCCTCAAAAACCATGGTTGATAAACCTGGTTGA 465 0.3978 MEGKKDEDFEALSASFLDVDDEINNLSVAAEKEDVILLRFPICCVIGHSYIGKTKLLNYIRGAADFEFEDNTTTKRITATYQSTYTQNAFNVKLTKIITQFKEHGLSTEIYWRNKEMGETVSIVPTSASSGEGIPDLLLLLAMWPSKTMVDKPG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04153 154 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 78 152 IPR015760 -
Trre14g04153 154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 144 IPR027417 -
Trre14g04153 154 Gene3D - 69 152 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04153 Trre-Chr14 50156653 50159076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04153 38 81 Eukaryotic Initiation Factors Gene Family AT1G76810 54.545 6.57e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04153 K03243 - cave:132177727 107.842