Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04150 ATGTCAAAAGAATCTGAAGAAATTAAAACTAGTAGTACTGAGCAATGGAAATGGTCTGAAATGCAAGGTCTTGAGCTTGTTGTGAATGATGATAATAACAATTCTGACCCTTTTAAAGGGAACCTACCAACAGTAATAGAAGAGGGTCAAGTTTCAATGGTGGAAACATCAGAAGCTAAGAAAGATGGTGGTAGTGGAAAAGAAGAGAAGGTTGATAAGAGTGTTCCTGCTGTTGGGTTTGGAGAGTTATTCAGATTTGCTGATGGATTGGATTATATTTTAATGACAATTGGAACTGTTGGAGCAATTGTTCATGGTTGTTCTTTGCCTATTTTTCTTAGGTTCTTTGCTGATCTTGTTAACTCTTTTGGTTCCAATGCTAATAATTTGGACAAGATGACACAAGAAGTTGTTAAGTATGCATTTTACTTCCTTGTGGTAGGTGCTGCTATTTGGGCATCTTCATGGGCAGAGATTTCATGTTGGATGTGGACCGGAGAGCGTCAATCAACTAAGATGAGGATCAAGTATCTGGAAGCTGCATTGAAACAAGACATTGAATTCTTCGACACCGAAGTTCGAACTTCCGATGTTGTTTTTGCAATCAACACTGATGCTGTGATGGTTCAGGATGCAATTAGTGAGAAGTTGGGAAATTTCATTCACTACATGGCTACTTTTGTTTCTGGTTTTGTTGTTGGATTCACTGCTGTTTGGCAATTGGCTTTGGTTACCCTTGCTGTTGTTCCTATGATAGCTGTGATTGGAGCCATTCACACCACTACTTTGGCTAAGCTCTCTAGTAAAAGCCAAGAAGCTCTTTCTCAAGCTGGCAACATTGTGGAACAGACGGTTGTGCAAATCCGTGTAGTGTTGGCTTTCGTTGGTGAGTCCCGAGCACTACAAGGCTACTCATCAGCCTTGAAGGTTGCTCAGAAGCTTGGGTACAAAACAGGATTAGCAAAGGGAATGGGATTAGGTGCAACTTACTTTGTTGTTTTCTGCTGCTACGCGCTTCTGTTGTGGTATGGAGGCTATCTTGTAAGGCATCACGAGACAAATGGAGGACTAGCCATTGCAACCATGTTTGCTGTCATGATTGGTGGAATAGGTTTGGGGCAATCTGCACCTAGCATGGCTGCATTTACAAAGGCGAGGGTTGCTGCGGCTAAGATTTTCCGGATAATCGATCACAGTCCTGGTATAGATAGAAACAGTGAATCAGGATTGGAATTGGAGACAATTACTGGACTTGTGGAACTTAAAAATGTCGACTTTTCATATCCATCTAGGCCTGAGGTTCTGATCCTCAATGATTTCTCCTTGAGTGTTCCTGCTGGAAAGACCATAGCTTTAGTTGGTAGCAGCGGCTCCGGAAAGAGCACTGTTGTTTCCCTTATTGAGAGATTCTATGACCCAACTTCAGGACAAGTTATGCTAGATGGTCATGACATTAAAACTTTGAAGCTTAAATGGTTGAGGCAACAGATAGGACTAGTGAGCCAAGAGCCTGCTTTGTTCGCTACCACGATTCGAGAAAATATACTCTTGGGAAGGCCTGATGCAAACCAGGTTGAGATTGAAGAAGCTGCTAGGGTTGCTAATGCTCATTCGTTCATCATCAAACTTCCTGAAGGCTATGAAACTCAGGTAGGAGAAAGAGGGTTACAACTTTCTGGAGGGCAAAAACAAAGAATAGCAATAGCAAGGGCAATGTTAAAAAATCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTGGACTCTGAATCAGAAAAACTGGTGCAAGAAGCACTTGACCGGTTCATGATTGGAAGAACGACTCTTGTAATTGCTCATCGCCTTTCCACAATTCGCAAAGCTGACCTCGTAGCCGTGATTCAACAAGGAAGTGTTTTTGAAATTGGAACTCATGATGAGCTATTCTCCAAAGGTGAAAATGGAGTCTATGCCAAGCTTATTAAGATGCAGGAGGTTGCCCATGAAACTGCTATGAATAATGCTAGAAAGAGTAGTGCAAGGCCTTCAAGTGCAAGAAACTCGGTTAGCTCTCCAATAATTGCTAGGAATTCTTCTTATGGACGGTCACCGTACTCACGTAGATTGTCCGATTTCTCTACATCAGATTTTAGTTTGTCCCTTGATGCATCATATCCAAACTACAAGCATGAAAAGCTTGCCTTCAAAGATCAAGCTGGTTCCTTTTGGAGACTAGTAAAAATGAACTCTCCTGAATGGCTATATGCTTTAATTGGTTCAATAGGTTCAATTGTTTGTGGATCACTTAGTGCTTTCTTTGCTTATGTTCTTAGCGCTGTCCTCAGTGTCTATTACAATCCGGACCACAAACACATGATCCGAGAAATAGATAAGTACTGCTACTTGCTGATTGGTCTTTCATCAACTGCACTTATCTTCAACACATTGCAACACTTCTTCTGGGATATTGTCGGGGAAAATCTTACGAAACGTGTGAGGGAGAAAATGCTGACTGCGGTGCTTAAGAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTTCTGCGAGGCTGGCTCTTGATGCCAATAATGTCAGATCAGCCATTGGAGACCGAATTTCGGTCATTGTGCAGAATACTGCACTTATGCTTGTTGCTTGTACTGCAGGTTTTGTGTTGCAGTGGCGTCTCGCCCTCGTCCTCATTGCTGTATTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTAGAAGCTGCTCATGCCAAGGCCACACAACTAGCAGGGGAAGCTATAGCCAATGTTAGAACTGTTGCAGCCTTCAATTCAGAATCGAAAATTGTTAACCTGTTTGCTTCCAACCTTGAAACACCACTACAAAGGTGCTTTTGGAAGGGACAGATTTCCGGAAGCGGATATGGAATAGCTCAGTTTGCACTTTATGCTTCTTATGCACTCGGTCTTTGGTACGCTTCTTGGCTAGTGAAACACGGAATATCCGACTTCTCTAAAACAATCCGAGTTTTCATGGTCCTCATGGTCTCTGCCAATGGTGCTGCCGAGACTTTAACACTGGCTCCTGACTTCATCAAGGGAGGTAGAGCCATGAGATCAGTCTTTGATCTCCTCGACCGTCGAACCGAGATTGAACCAGATGATCAAGATGCTACTCCTGTTCCTGACCGTCTTCGCGGTGAAGTTGAACTTAAGCATGTGGACTTCTCTTATCCCACTAGACCAGATATGCCGGTTTTCCGTGACCTTAATCTTCGTATCCGAGCTGGCAAAACTCTTGCCCTTGTTGGACCTAGTGGCTGCGGTAAGAGCTCGGTGATTGCACTTATACAGAGATTCTATGATCCAACATCTGGCCGGGTAATGATTGATGGAAAAGACATCAGAAAATACAACCTCAAGTCCTTAAGAAGACACATTTCTGTAGTACCTCAAGAGCCATGCCTCTTTGCTACTACGATTTATGAAAACATTGCATATGGCCATGACTCAGCAACAGAAGCCGAGATAATCGAAGCTGCAACACTTGCTAATGCTCACAAGTTCATATCTTCTCTACCTGACGGATACAAAACATTTGTAGGGGAGAGAGGCGTTCAACTCTCCGGGGGACAAAAACAAAGAATAGCAGTTGCTCGTGCTTTTTTGAGGAAAGCCGAGCTTATGCTTCTTGACGAGGCAACAAGTGCACTTGATGCTGAGTCAGAGAGGTCTGTTCAAGAGGCTCTAGACCGTGCTTCAACGGGAAAAACAACCATCATTGTTGCACATAGGTTATCAACTATAAGGAATGCCAATGTGATCGCTGTGATTGATGATGGTAAAGTAGCTGAACAAGGTTCACATTCACAGTTGATGAAAAATCACCAGGATGGAATATATGCGCGCATGATTCAATTACAAAGGTTTACACACAATGAGGTAATTGGTATGGCATCTGGTTCAACTTCTTCAACATGA 3996 0.4292 MSKESEEIKTSSTEQWKWSEMQGLELVVNDDNNNSDPFKGNLPTVIEEGQVSMVETSEAKKDGGSGKEEKVDKSVPAVGFGELFRFADGLDYILMTIGTVGAIVHGCSLPIFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALKQDIEFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGESRALQGYSSALKVAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHETNGGLAIATMFAVMIGGIGLGQSAPSMAAFTKARVAAAKIFRIIDHSPGIDRNSESGLELETITGLVELKNVDFSYPSRPEVLILNDFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGHDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVFEIGTHDELFSKGENGVYAKLIKMQEVAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASYPNYKHEKLAFKDQAGSFWRLVKMNSPEWLYALIGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHKHMIREIDKYCYLLIGLSSTALIFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSESKIVNLFASNLETPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDQDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLNLRIRAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFLRKAELMLLDEATSALDAESERSVQEALDRASTGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSQLMKNHQDGIYARMIQLQRFTHNEVIGMASGSTSST 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04150 1331 CDD ABC_MTABC3_MDL1_MDL2 419 658 - -
Trre14g04150 1331 Pfam ABC transporter transmembrane region 752 1021 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trre14g04150 1331 Pfam ABC transporter transmembrane region 95 368 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trre14g04150 1331 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1074 1310 IPR003439 GO:0005524
Trre14g04150 1331 Pfam ABC transporter 1093 1241 IPR003439 GO:0005524
Trre14g04150 1331 SUPERFAMILY ABC transporter transmembrane region 82 400 IPR036640 GO:0005524|GO:0016020
Trre14g04150 1331 Pfam ABC transporter 437 586 IPR003439 GO:0005524
Trre14g04150 1331 ProSitePatterns ABC transporters family signature. 1213 1227 IPR017871 GO:0005524|GO:0016887
Trre14g04150 1331 FunFam ABC transporter B family member 19 1040 1062 - -
Trre14g04150 1331 SMART AAA_5 1101 1293 IPR003593 GO:0016887
Trre14g04150 1331 SMART AAA_5 446 632 IPR003593 GO:0016887
Trre14g04150 1331 CDD ABC_MTABC3_MDL1_MDL2 1074 1313 - -
Trre14g04150 1331 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 97 384 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trre14g04150 1331 FunFam ABC transporter B family member 1 1064 1314 - -
Trre14g04150 1331 CDD ABC_6TM_Pgp_ABCB1_D1_like 95 392 - -
Trre14g04150 1331 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 751 1038 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trre14g04150 1331 SUPERFAMILY ABC transporter transmembrane region 738 1058 IPR036640 GO:0005524|GO:0016020
Trre14g04150 1331 Gene3D - 417 682 IPR027417 -
Trre14g04150 1331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1065 1313 IPR027417 -
Trre14g04150 1331 FunFam ABC transporter B family member 1 409 659 - -
Trre14g04150 1331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 658 IPR027417 -
Trre14g04150 1331 ProSitePatterns ABC transporters family signature. 558 572 IPR017871 GO:0005524|GO:0016887
Trre14g04150 1331 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 419 655 IPR003439 GO:0005524
Trre14g04150 1331 FunFam ABC transporter B family member 1 730 1039 - -
Trre14g04150 1331 CDD ABC_6TM_Pgp_ABCB1_D2_like 741 1056 - -
Trre14g04150 1331 Gene3D - 1065 1320 IPR027417 -
Trre14g04150 1331 FunFam ABC transporter B family member 1 82 417 - -
Trre14g04150 1331 Gene3D ABC transporter type 1, transmembrane domain 142 1047 IPR036640 GO:0005524|GO:0016020
Trre14g04150 1331 PANTHER ABC TRANSPORTER B FAMILY 59 806 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04150 Trre-Chr14 50114576 50120479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04150 97 675 Calmodulin-binding Proteins AT2G36910 39.243 2.20e-119 402