Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04144 ATGGGAAAATTAAGTACTAGTTCTTGTAAGGGATTTTGGAAAGGAGGATTTGGAATAATGATGAGGAAAGTAGTGGAGAAAAAAATATTATGGTCAGAAAAAGGGGTTAAGCAAGGTCATTTTGTGGTGATTGCAACACAAGGGTGGAAAGCAGAGAGATTTTGTATTGAATTGGGATATTTAGATCATCCTGAATTTGTGAAATTGTTAAAGCAAGCTGAAGAAGAGTTTGGATTTTCTCAAGTTGGAGCACTTGAAATTCCTTGTGAACCAGATGAGTTGAAGAAAATCATTGGAAGGAAAAAACAACACATCAACAAGGGTATTACTATTACTTGTTAG 342 0.348 MGKLSTSSCKGFWKGGFGIMMRKVVEKKILWSEKGVKQGHFVVIATQGWKAERFCIELGYLDHPEFVKLLKQAEEEFGFSQVGALEIPCEPDELKKIIGRKKQHINKGITITC 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04144 113 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 97 IPR003676 GO:0009733
Trre14g04144 113 Pfam Auxin responsive protein 33 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04144 Trre-Chr14 50066823 50067164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04144 36 99 Calmodulin-binding Proteins AT4G34750 40.625 1.39e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04144 - K14488 gmx:100795119 151.754