Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04143 ATGGATGTTACAAAGAAGTTGAAGCTAAAGTCTTTGATATCAAAGGTGTTAAAGGGTCTTCAATTCTTGGAAATTAGTAAAGCATATAGAAGAAGAGGTAATTATGTGAGAATCATAGGCATTGATGATGGTGATGATAAAGAGATGAGTGAAAATGCAATAATAGTTCCACAAGGTTATTTTGCGGTTATAGCAATGCAAGGTGAAGAACCAAAGAGATTTATTCTTGAGTTGGAATATTTAAGGGATCATCATTTCATGAAACTATTGGAACAAGCTAAGGAAGAATTTGGATATGAACAAAAGGGTGCTCTTGCATTGCCATGTAGGCCTCAAGATCTTCAAAAGATTATAGAGAATCGACATAATACAACTTTGTAA 381 0.336 MDVTKKLKLKSLISKVLKGLQFLEISKAYRRRGNYVRIIGIDDGDDKEMSENAIIVPQGYFAVIAMQGEEPKRFILELEYLRDHHFMKLLEQAKEEFGYEQKGALALPCRPQDLQKIIENRHNTTL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04143 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 117 IPR003676 GO:0009733
Trre14g04143 126 Pfam Auxin responsive protein 37 118 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04143 Trre-Chr14 50055386 50055766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04143 4 109 Calmodulin-binding Proteins AT5G20810 36.036 4.25e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04143 - K14488 gmx:100794597 114.39