Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04137 ATGAAGTGCTTTCCATTCCACTCTGGAGATAAGAAAGATGAACCGAAAGGCTTGCAATCTGCGTCGGGCCGTTCAGAAAGTTCCACATATGTTGATGCTGAAGGTAAAAGGTTTAGTTCTGAATTGAATTCTCAGGATGTCTCGGATAGTGGCAGCTTGGAATCCCTCAGGAGGAACTCGCGTCCCGATATGTCCCAAAGACCTAGCAACCTTAGAGTGTTTACTGTATCTGAACTTAAATCAGCCACAAAGAATTTCAGCCGATCGGTTATGCTTGGAGAGGGTGGGTTCGGGTGTGTCTATCAGGGAGTAATTAGAAGCGTAGATGATCCATCTAGAAGAATTGAGGTTGCAGTTAAACAACTTAGTAAAAGAGGAGTGCAGGGGCACAGGGAATGGGTGACGGAAGTGAATGTTCTCGGCATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGCTACTGCGCCGATGATGACGAAAGAGGTATCCAGCGGCTTCTTATATATGAATACATGCCAAACAGAAGTGTGGAACACCATTTATCTCACCGAGCAGCGACTCCTCTCCCGTGGAGTAGGAGAATAAAAATAGCACAAGATGCTGCTCGTGGATTAACATACTTGCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAACATCCTTCTGGATGATCAGTGGAATGCAAAGCTATCAGACTTTGGGTTAGCAAGACTCGGACCATCGGATGGACTAACCCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTACGCAGCTCCTGAGTATCTCCAAACCGGACGTCTCACATCAAAGAATGACGTATGGAGCTACGGTGTTTTCCTTTATGAGCTCATTACTGGCAGGCGCCCTTTAGATCGAAATCTTCCCAGGGGTGAACAGAAGCTGTTGGAATGGATAAAGCCATACCTATCAGATGCAAAGAAATTTCAACTTATATTGGATCCAAGACTTGATAAGAAACAAGTAATCAAATCAGCTCAAAGACTTGCTACGATAGCTAACCGATGCTTAGTTAAAAATCCAAAGAGTCGCCCAAAGATGAGCGAGGTTTTGAAAATGGTGAATGAAATAGTAGAATCATCATCCAGTAATAATTCACATATACCATCGAAGAATGTGTCGAGAGCAGAAGTTTCACATGACGCTGAAATAAACAAGAAACGGACTATGGATCAGAAGCCTGGAGAAAGTAATTGGTTTGTTAGGATGTGGAGACCAAAGCTTGTAAGAACATGTTAA 1278 0.4327 MKCFPFHSGDKKDEPKGLQSASGRSESSTYVDAEGKRFSSELNSQDVSDSGSLESLRRNSRPDMSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYQGVIRSVDDPSRRIEVAVKQLSKRGVQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRAATPLPWSRRIKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYLQTGRLTSKNDVWSYGVFLYELITGRRPLDRNLPRGEQKLLEWIKPYLSDAKKFQLILDPRLDKKQVIKSAQRLATIANRCLVKNPKSRPKMSEVLKMVNEIVESSSSNNSHIPSKNVSRAEVSHDAEINKKRTMDQKPGESNWFVRMWRPKLVRTC 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04137 425 CDD STKc_IRAK 92 370 - -
Trre14g04137 425 Gene3D Transferase(Phosphotransferase) domain 1 172 395 - -
Trre14g04137 425 SUPERFAMILY Protein kinase-like (PK-like) 61 367 IPR011009 -
Trre14g04137 425 ProSitePatterns Protein kinases ATP-binding region signature. 92 120 IPR017441 GO:0005524
Trre14g04137 425 MobiDBLite consensus disorder prediction 1 68 - -
Trre14g04137 425 FunFam Serine/threonine-protein kinase PCRK2 172 381 - -
Trre14g04137 425 Gene3D Phosphorylase Kinase; domain 1 57 171 - -
Trre14g04137 425 MobiDBLite consensus disorder prediction 20 68 - -
Trre14g04137 425 Pfam Protein tyrosine and serine/threonine kinase 91 365 IPR001245 GO:0004672|GO:0006468
Trre14g04137 425 ProSiteProfiles Protein kinase domain profile. 86 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04137 425 FunFam Serine/threonine-protein kinase BIK1 53 171 - -
Trre14g04137 425 MobiDBLite consensus disorder prediction 1 19 - -
Trre14g04137 425 MobiDBLite consensus disorder prediction 374 393 - -
Trre14g04137 425 PANTHER OS01G0588500 PROTEIN-RELATED 48 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04137 Trre-Chr14 49996218 49998410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04137 72 364 Glycoside Hydrolase AT3G07070 46.780 2.62e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre14g04137 PK_Tyr_Ser-Thr 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04137 - - gsj:114400704 726.472