Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04126 ATGAAAGTGAATGGTGCTGATCCTTTGAATTGGGGTGTGGCTGCTGAGGCAATGAAGGGAAGTCACTTAGATGAGGTGAAGCGTATGGTGGAGGAGTACCGGAAACCGGTTGTCCGTCTTGGTGGCGAGACACTAACCATTTCTCAGGTGGCTGCCATTGCTGCACACGATGGTGCGATGGTGGAGCTATCAGAATCTGCTAGAGCCGGTGTTAAGGCAAGCAGTGACTGGGTTATGGAGAGTATGAACAAAGGTACCGACAGTTACGGTGTCACCACAGGGTTCGGCGCTACCTCGCACCGCCGAACCAAACAAGGTGGTGCTTTGCAGAAAGAACTCATAAGATTTTTGAATGCCGGAATATTCGGGAATGGAACAGAGTCAACTCACATCCTACCACACACAGCAACAAGAGCTGCCATGCTACTTCAGGAGATTTAG 441 0.5034 MKVNGADPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIAAHDGAMVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESTHILPHTATRAAMLLQEI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04126 146 PANTHER HISTIDINE AMMONIA-LYASE 3 144 IPR001106 -
Trre14g04126 146 Gene3D - 1 144 IPR024083 -
Trre14g04126 146 Pfam Aromatic amino acid lyase 45 143 IPR001106 -
Trre14g04126 146 SUPERFAMILY L-aspartase-like 7 143 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04126 Trre-Chr14 49817810 49819611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04126 1 144 Monolignol Biosynthesis Gene Families AT2G37040 78.621 1.67e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04126 K10775 - gmx:100811101 248.825