Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04102 ATGAGAGAAAATATGGATGCAAAACGATTCCACTCCGTCGTCGACGCTGACATCGAGGTTGCGCTTCAGAAAGCAGAAACTGCTTCTAAGGAGAAAAATAGGGCTTCAATTGTAGCGATCAATGCCGAGATTCGTCGTACTAAGGCTAGGTTACTGGAAGAGATCCCTAAGTTGCATAGATTGGCAGTAAAAAAGGTAAAGGGGCTTCCGTCGCAAGAATTTGCTGCCCGTAATGATTTGGTTCTTTCATTGCCAGAGAGGATCCAAGCAATCCCGGATGGGACTCCTGCTGCTCCCAAACAAACTGGAGATGGTCGATTCGATGATGGATACTTTGACCAAACTGAAGAATCAAGTCAGTTTAGGCAGGAGTATGAAATGCGTAAAATGAAACAGGATCAAGGTTTGGATGTGATTGCAGAAGGATTGGATACTTTGAAAAACATGGCACACGATATGAATGAGGAATTTGATAAGCAAGTTCCACTGATGGATGAGATTGATACAAAGGTGGACAAGGCATCCTCTGACCTTAAAAATACCAATGTTAGACTTAAAGACACAGTTACCCAGCTACGATCCACTCGAAACTTCTGTATTGATATTGTTTTATTGATTATAATTTTGGGAATTGCTGCCTATTTGTACAATGTGCTAAAATGA 663 0.4148 MRENMDAKRFHSVVDADIEVALQKAETASKEKNRASIVAINAEIRRTKARLLEEIPKLHRLAVKKVKGLPSQEFAARNDLVLSLPERIQAIPDGTPAAPKQTGDGRFDDGYFDQTEESSQFRQEYEMRKMKQDQGLDVIAEGLDTLKNMAHDMNEEFDKQVPLMDEIDTKVDKASSDLKNTNVRLKDTVTQLRSTRNFCIDIVLLIIILGIAAYLYNVLK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04102 220 Pfam SNARE domain 163 212 IPR000727 -
Trre14g04102 220 PANTHER SYNTAXIN 10 208 IPR045242 -
Trre14g04102 220 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 126 188 IPR000727 -
Trre14g04102 220 CDD SNARE_Qc 131 186 - -
Trre14g04102 220 SUPERFAMILY SNARE fusion complex 119 186 - -
Trre14g04102 220 MobiDBLite consensus disorder prediction 90 111 - -
Trre14g04102 220 FunFam Putative syntaxin-71-like 126 187 - -
Trre14g04102 220 Gene3D - 126 187 - -
Trre14g04102 220 SMART tSNARE_6 121 188 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04102 Trre-Chr14 49553728 49557710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04102 9 220 SNARE and Associated Proteins AT3G09740 70.306 7.46e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04102 K08506 - gmx:100819272 338.191