Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04093 ATGGCTGATGATTTTGAATTTTCCGATAAAGTTCCTCCTTCCTTCGATCGCGTGAATGCTGGATCTCAAGGGTTCAACCCGGGCTTAATTGTTCTCCTGGTTGTTGGTGGGTTGCTATTGACATTCCTCATCGGAAATTATGCGCTCTACGTTTATGCACAGAAAACCATCCCTCCAAGAAAAAAGAAGCCAATCTCAAAAAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGGGTCTCAGCACCAGGAGAGTAG 255 0.4431 MADDFEFSDKVPPSFDRVNAGSQGFNPGLIVLLVVGGLLLTFLIGNYALYVYAQKTIPPRKKKPISKKKMKKERLKQGVSAPGE 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04093 84 MobiDBLite consensus disorder prediction 62 84 - -
Trre14g04093 84 PANTHER DNA-BINDING PROTEIN S1FA2 1 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Trre14g04093 84 Pfam DNA binding protein S1FA 21 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04093 Trre-Chr14 49518106 49520280 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Trre14g04093 S1FA 3.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04093 - - gmx:100499820 133.65