Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04092 ATGGCTATATTCCGTACCGCCGTGAACATGGCTCGTCGTCGTTTCTCCACTGGTGCTGGTGGAGCTACTACTCCTCTGAGGCATAAGGCTGGATCTCAAGGGTTCAATCCAGGCTTAATAGTTCTCTTGGTTGTTGGTGGGTTGCTATTAACATTCCTCATTGGAAATTACGCGCTCTACATTTATGCGCAGAGAACCATCCCTCCAAGAAAAAAGAAGCCAATCTCAAAAAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGGGTCTCAGCACCAGGAGAGTAG 285 0.4702 MAIFRTAVNMARRRFSTGAGGATTPLRHKAGSQGFNPGLIVLLVVGGLLLTFLIGNYALYIYAQRTIPPRKKKPISKKKMKKERLKQGVSAPGE 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04092 94 PANTHER DNA-BINDING PROTEIN S1FA2 27 94 IPR006779 GO:0003677|GO:0005634|GO:0006355
Trre14g04092 94 MobiDBLite consensus disorder prediction 71 94 - -
Trre14g04092 94 Pfam DNA binding protein S1FA 31 94 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04092 Trre-Chr14 49513389 49516862 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Trre14g04092 S1FA 2.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04092 - - tpra:123892939 110.153