Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04065 ATGGATATTGAAGAAGTAGAAAGAGTAGTTGTTGCCAAACCAGTTGCTTCAAGACCAAAATGTTCTACTTACAAATCTTTCTCAGAGCTTCTAGCAGGTGCAATCAATGACACTCCTCCAATTGTATCTTCTCAAACTACAATTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCGACATTGAATCTCCCCCATGCTGGATCTATTTCTTCTCAGTCTGGCATGGTTCCCAAACCCGACACCAATCAGTCTCTCATTTACAAGCCGACAGCAAAATTTGTGTCAAAGACAACCGTCTCTCTCTTGGCAAACATGGGAATTTGCAATACTAATCCGCAACAATCACCGCAATTAGTGGAGACCAATCTTCAACATCTAAACCATGACAAATTTAGATCCAATATGAGCTCAAATTTTCATCAGAACATTACCCTTCCTAAAGAAACATACCACCAGGCCACCGAGCCTTGTAAGACGGCACAGCAGAACATGGAAGAGGACCAAAAAGCTTTAACATCATCGACAATGACTGCTGATAGACCTTCTTATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTATTATAAGTGTACACATCCTAACTATCCAGTTAAAAAGAAAGTTGAAAGATCATTAGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAATCATGGAAAGCCGCAACTTCAAAAGCGTAACGCAGGAGTGGCACAAGGATCAGGAATGGTTTCTGATGGATTGGTTCAAGATATGAATAATAATAATCAGAATGAAAGGATTGAAGGAAGAATGGAGAATCATGTCAAAGCTTCACAGCCTAATGATTCTGCTCTAGAAAATTCATGCGGTCTAAGCGGGGAATGTGATGAAGGAAGCAAAGGATTTGAGGGAGAGGAAGATGATCCTAGAAGTAAAAGAAGGAAAAATGATAATCAATCAAATGAAGGAGCAGTATCAGAGGAAGGTTTAGTAGAGCCACGCATTGTGATGCAAAATTCTGTCGATTCTGAAATCCTTGGAGACGGCTTTCGCTGGAGGAAATATGGACAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTAATATCAAGTGTAACGTTCGCAAACATGTGGAAAGAGCGATAGATGACCCAAAATCATTTGTGACTACATATGAAGGAAAGCACAACCATGAGATGCCACTCAAGAACACAACAGCAACTGTGTCCTCTGAAAAAGATTCACAGGCTTCTCTTAGTAAAGACAAACCATACTGA 1317 0.4009 MDIEEVERVVVAKPVASRPKCSTYKSFSELLAGAINDTPPIVSSQTTISAIRPKTVRFKPTLNLPHAGSISSQSGMVPKPDTNQSLIYKPTAKFVSKTTVSLLANMGICNTNPQQSPQLVETNLQHLNHDKFRSNMSSNFHQNITLPKETYHQATEPCKTAQQNMEEDQKALTSSTMTADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNYPVKKKVERSLDGEIAEIVYKGEHNHGKPQLQKRNAGVAQGSGMVSDGLVQDMNNNNQNERIEGRMENHVKASQPNDSALENSCGLSGECDEGSKGFEGEEDDPRSKRRKNDNQSNEGAVSEEGLVEPRIVMQNSVDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERAIDDPKSFVTTYEGKHNHEMPLKNTTATVSSEKDSQASLSKDKPY 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04065 438 FunFam WRKY transcription factor 57 340 414 - -
Trre14g04065 438 MobiDBLite consensus disorder prediction 234 268 - -
Trre14g04065 438 ProSiteProfiles WRKY domain profile. 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 MobiDBLite consensus disorder prediction 311 329 - -
Trre14g04065 438 SUPERFAMILY WRKY DNA-binding domain 348 414 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 Gene3D WRKY domain 339 415 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 Gene3D WRKY domain 168 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 119 429 IPR044810 GO:0003700
Trre14g04065 438 Pfam WRKY DNA -binding domain 356 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 Pfam WRKY DNA -binding domain 185 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 ProSiteProfiles WRKY domain profile. 349 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 FunFam WRKY transcription factor 162 243 - -
Trre14g04065 438 MobiDBLite consensus disorder prediction 414 428 - -
Trre14g04065 438 SMART WRKY_cls 183 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 SMART WRKY_cls 354 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 SUPERFAMILY WRKY DNA-binding domain 179 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g04065 438 MobiDBLite consensus disorder prediction 405 438 - -
Trre14g04065 438 MobiDBLite consensus disorder prediction 280 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04065 Trre-Chr14 49218814 49221627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04065 81 415 WRKY Transcription Factor Family AT2G37260 45.833 5.40e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g04065 WRKY 6.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04065 - - gmx:100794069 652.129