Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04051 ATGGGGAAAGGAGGTGAAAATTATGGTAGAAAAGAGAACACGAGTTCTGATAATAACAATTCAGACGGTGAAATTTTCAAAGCATGGGCGAAGGATGTGCGTGAATGCGAAGAACACTTTAAGGTGAGTGTGAAATCAGGGTTGAGTAATGAAGAGGTTGAGAATCGGCGTAAGATCTATGGTTTGAATGAATTGGAGAAACATGATGGACAATCGATTTGGAAATTGGTTTTGGAACAATTTAACGATACTTTGGTTCGGATTCTTCTCGCTGCGGCTATAATTTCGTTTGTTTTGGCTTGGTATGATGGCGATGAAGGTGGCGAGATGGAGATTACGGCGTTTGTTGAGCCTCTGGTGATATTTTTGATATTGATCGTGAACGCTATTGTTGGTGTTTGGCAAGAGAGTAATGCGGAAAAAGCGTTGGAGGCTTTGAAGGAGATTCAATCGGAGCATGCCTCGGTTATTCGGAATAACACGAAAATTCCTAGCTTGCCGGCTAAGGATCTTGTTCCTGGTGATATTGCGGAGCTTAAGGTTGGAGATAAGGTGCCTGCGGATATGCGGGTTGTGGAATTGATAAGTTCTACTTTGAGATTGGAGCAGGGTTCCTTGACTGGTGAGAGTGAAGCGGTGAATAAGACTAACAAGCCTGTTGCTGAGGATTCTGATATTCAAGGCAAAAAGTGTATTGTTTTCGCTGGGACGACCGTTGTTAATGGTCATTGCTTTTGTTTGGTTACTCAGACTGGTATGGAGACTGAGATTGGGAAGGTGCATAACCAGATACAGGAGGCGTCGCAGAGTGAGGAAGATACCCCTTTGAAGAAGAAGCTCAATGAATTTGGAGAGAGGTTGACAATGATGATTGGACTCATTTGTATTTTGGTTTGGCTCATCAATGTTAAGTATTTCCTTACATGGGAGTATGTTAATGGTTGGCCTGCGAACTTCAAGTTTTCGTTTGAGAAGTGTACGTATTACTTTGAGATTGCTGTGGCATTGGCTGTGGCTGCTATTCCCGAGGGATTGCCTGCGGTTATCACAACTTGTCTTGCACTTGGTACTCGCAAGATGGCCCAGAAGAATGCCCTAGTTCGGAAACTACCAAGTGTGGAAACTCTAGGTTGTACAACTGTTATTTGTTCGGATAAAACCGGTACATTGACTACAAACCAGATGGCTGTTTCGAAACTAGTAGCTATTGGCCCTAATGTAGATGCACTGCGAGCTTTTAAGGTGGAAGGAACTACATATAATCCAAATGATGGTCAAATAGAGAATTGGCCAGCTGGTCGATTGGATGCGAATCTTCAGATGATAGCGAAAATAGCTGCTGTTTGTAATGATGCTGGAGTGTCACAGTCAGAGCATAAGTTTATTGCCCATGGAATGCCTACTGAAGCAGCTTTGAAGGTGTTGGTAGAGAAGATGGGCCTTCCTGAAGGATCCAAGGATGTGCAATCAGGAAGCAAAAGTACCATACTGCGTTGTTGTGAATGGTGGAATGAACATGACCGCCGGATTGCTACTCTAGAGTTTGACCGTGACAGGAAGTCAATGGGTGTTATTGTAGACTCTGGTGCGGGGAGAAAGTCGCTTCTGGTTAAGGGTGCTGTTGAAAATGTGTTGGATAGAAGCTCTAAAGTTCAGTTGCGTGATGGTTCAATTGTGAAACTGGACAATAATGCTAAGAACCTCATATTGCAAGCTCTTCATGAAATGTCCACCAGTGCATTACGCTGTTTGGGATTTGCCTACAAGGATGTGCTCACTAGTTTTGAAGGCTACAATGGTAAAGACGATCATCCAGCCCACCAGCTTTTGCTTGATCCTTCCAATTATTCATCAATTGAAAGTGAACTCATTTTTGTTGGCTTGGTTGGGTTGAGGGATCCTCCTAGGGAGGAGGTATACCAAGCAATAGAAGACTGCAGAGCAGCTGGAATTCGTGTTATGGTTATAACCGGAGACAACAAAAACACTGCTGAAGCTATCTGTCGGGAAATAGGTGTATTTGCGCCCAATGAAGACATTAGTTCAAAAAGTGTAACTGGTAGAGATTTTATGGAACTCCGTGATAAAAAAGCTTATCTGAGACAGAGTGGTGGGCTTTTGTTTTCGAGGGCTGAACCAAGACACAAGCAGGACATTGTGAGGCTTCTTAAAGAAGATGGGGAGGTTGTTGCTATGACTGGAGATGGTGTTAATGATGCACCCGCCTTGAAGCTTGCCGACATTGGTATTGCAATGGGCATTGCAGGGACAGAGGTGGCAAAGGAAGCTTCAGATATGGTGTTAGCAGACGATAATTTTAGTTCAATTGTTGCTGCTGTCGAGGAAGGTAGATCTATCTACAATAACATGAAGGCTTTTATCAGGTACATGATCTCTTCCAATATTGGCGAGGTTGCTTCTATATTTCTTACAGCTGCACTAGGAATTCCTGAAGGACTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACTGACGGACCCCCTGCAACAGCTTTGGGATTTAACCCTCCAGATAAGGATATAATGAAGAAACCTCCTCGTCGCAGTGATGACTCACTAATTAACTTGTGGATTTTATTCCGCTATCTGGTTATTGGGATTTATGTTGGATTAGCTACTGTTGGCGTCTTTATTATATGGTATACACATGGTTCCTTTTTGGGAATTGACCTCAGCGGGGATGGACATACTCTTGTGACTTACTCCCAACTTGCCAACTGGGGTCAATGCTCCACTTGGAATAACTTCACTGCTGCTCCCTTCACCGCTGGTTCTAGAGTCATCTCTTTTGATGCCGACCCATGCGACTACTTCCACACTGGTAAAGTGAAAGCTATGACACTGTCCCTCTCTGTGTTGGTAGCCATTGAAATGTTCAACTCTCTCAATGCCCTGTCTGAAGATGGAAGTCTTTTGACAATGCCCCCGTGGGTAAACCCTTGGCTTCTTTTGGCAATGTCTGTTTCATTTGGGCTGCACTTTTTGATCTTATACGTGCCATTCTTAGCACAAGTATTTGGCATCGTGCCTCTGAGCTTCAACGAGTGGCTTTTGGTTTTGGCGGTTGCATTGCCTGTCATTCTAATTGACGAGATTTTGAAATTTGTTGGGAGATGTACAAGCGGGTCTGCAAGAAGATCAAAGCAAAAAACAGAGTAG 3183 0.4376 MGKGGENYGRKENTSSDNNNSDGEIFKAWAKDVRECEEHFKVSVKSGLSNEEVENRRKIYGLNELEKHDGQSIWKLVLEQFNDTLVRILLAAAIISFVLAWYDGDEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHASVIRNNTKIPSLPAKDLVPGDIAELKVGDKVPADMRVVELISSTLRLEQGSLTGESEAVNKTNKPVAEDSDIQGKKCIVFAGTTVVNGHCFCLVTQTGMETEIGKVHNQIQEASQSEEDTPLKKKLNEFGERLTMMIGLICILVWLINVKYFLTWEYVNGWPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAIGPNVDALRAFKVEGTTYNPNDGQIENWPAGRLDANLQMIAKIAAVCNDAGVSQSEHKFIAHGMPTEAALKVLVEKMGLPEGSKDVQSGSKSTILRCCEWWNEHDRRIATLEFDRDRKSMGVIVDSGAGRKSLLVKGAVENVLDRSSKVQLRDGSIVKLDNNAKNLILQALHEMSTSALRCLGFAYKDVLTSFEGYNGKDDHPAHQLLLDPSNYSSIESELIFVGLVGLRDPPREEVYQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFAPNEDISSKSVTGRDFMELRDKKAYLRQSGGLLFSRAEPRHKQDIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSSIVAAVEEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINLWILFRYLVIGIYVGLATVGVFIIWYTHGSFLGIDLSGDGHTLVTYSQLANWGQCSTWNNFTAAPFTAGSRVISFDADPCDYFHTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSFNEWLLVLAVALPVILIDEILKFVGRCTSGSARRSKQKTE 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04051 1060 MobiDBLite consensus disorder prediction 9 23 - -
Trre14g04051 1060 Gene3D - 79 1046 - -
Trre14g04051 1060 Pfam Cation transporter/ATPase, N-terminus 29 96 IPR004014 -
Trre14g04051 1060 SUPERFAMILY Calcium ATPase, transduction domain A 152 263 IPR008250 -
Trre14g04051 1060 Pfam haloacid dehalogenase-like hydrolase 380 747 - -
Trre14g04051 1060 NCBIfam HAD-IC family P-type ATPase 322 404 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre14g04051 1060 NCBIfam HAD-IC family P-type ATPase 120 310 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre14g04051 1060 NCBIfam HAD-IC family P-type ATPase 707 814 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre14g04051 1060 FunFam Calcium-transporting ATPase, putative 129 265 - -
Trre14g04051 1060 Gene3D - 393 634 IPR023299 GO:0000166
Trre14g04051 1060 SMART Cation_ATPase_N_a_2 27 101 IPR004014 -
Trre14g04051 1060 MobiDBLite consensus disorder prediction 1 23 - -
Trre14g04051 1060 SUPERFAMILY Calcium ATPase, transmembrane domain M 27 1047 IPR023298 -
Trre14g04051 1060 FunFam Calcium-transporting P-type ATPase, putative 629 778 - -
Trre14g04051 1060 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 393 634 - -
Trre14g04051 1060 SUPERFAMILY HAD-like 381 837 IPR036412 -
Trre14g04051 1060 Pfam Cation transporting ATPase, C-terminus 818 1044 IPR006068 -
Trre14g04051 1060 Gene3D - 380 778 IPR023214 -
Trre14g04051 1060 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 390 631 IPR023299 GO:0000166
Trre14g04051 1060 Pfam E1-E2 ATPase 149 363 - -
Trre14g04051 1060 ProSitePatterns E1-E2 ATPases phosphorylation site. 385 391 IPR018303 -
Trre14g04051 1060 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 797 1051 - -
Trre14g04051 1060 Gene3D - 47 265 - -
Trre14g04051 1060 PRINTS P-type cation-transporting ATPase superfamily signature 757 769 - -
Trre14g04051 1060 PRINTS P-type cation-transporting ATPase superfamily signature 383 397 - -
Trre14g04051 1060 PRINTS P-type cation-transporting ATPase superfamily signature 627 638 - -
Trre14g04051 1060 PRINTS P-type cation-transporting ATPase superfamily signature 649 659 - -
Trre14g04051 1060 PRINTS P-type cation-transporting ATPase superfamily signature 202 216 - -
Trre14g04051 1060 PRINTS P-type cation-transporting ATPase superfamily signature 733 752 - -
Trre14g04051 1060 Coils Coil 139 159 - -
Trre14g04051 1060 PANTHER CALCIUM-TRANSPORTING ATPASE 29 1055 - -
Trre14g04051 1060 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 253 409 - -
Trre14g04051 1060 SFLD p-type atpase 364 785 IPR044492 -
Trre14g04051 1060 SFLD C1.7: P-type atpase like 364 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04051 Trre-Chr14 49100485 49106762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04051 1 1060 Primary Pumps ATPases(2) AT1G07670 79.437 0.0 1740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04051 K01537 - gmx:100788807 1897.48