Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04041 ATGACTATATCTTGCTGGAAACCAACTGTGGAAGGTGATGTGAAAGGGAAAATTGATGGATTGTTATGGTATAAGGATTTGGGGAACCATCTTTATGGTGAATTTTCAATGGCTGTAATTCAAGCTAATAGTTCATTGGAGGATCGTAGTCAATTTGAATCTGGACCCTTAAGTTCTGATTATTTAGGTCCTCAAGGAACCTTTATAGGTGTTTATGATGGTCATGGTGGAACTGCAGCTGCTCAGTTTGTTAATGATAATCTATTCTCCAATTTCAAGAGTTTTGCAGCTGAAGATCAAGGTGTTTCAGAAAAGGTTATAAGAAGGGCATTTTCGGCAACAGATGATGCTTTTCTATCTCTTGTAAAGAAGCAGTGGCTAACCAAGGCACAGATAGCATCTGCTGGTACATGTTGTTTGGCGGGGATAATTTGCAACGGTAATTTGTATATTGCAAATGCTGGAGATTCAAGAGCGGTGTTAGGAAGAGCGAGGAGGGGAACAAAAGAAACATTAGCTGTTCAGTTATCAGTAGAACACAATGTTAATATAGATACTGAGAGAGATGATGTTCGTTCAAAGCACCCCTATGATCCACAAATTGTGGTTATGAAACACTCAGTTTGGCGTGTGAAAGGCATTATACAGGTTTCAAGATCCATTGGTGATGCATATCTAAAGAAAGCAGAATTTAACAGGGAGCCTCTGCCGCTTAAGTTCAGATTACCTGAAACCTTTTTCAAGCCAATTCTAAGTAGCGAGCCATCGATATCAGTTCATAAAATCCAACCTGAAGATCAATTTCTCATATTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAACAGCTGTCAATATCGTTAGCAATAGTCCGCGCAATGGAATAGCTAGGCGACTTGTGAAAGCAGCACTCAAAGAAGCGGCTAAGAAAAGAGAAATAAGATTCTCAGACCTCCAAAAGATTGAACAAGGAGTGAGGAGACACTTCCATGATGATATTACAGTAATTGTTGTATATCTAAATCCGAAACTGATTGATAATGGCGCTCAATGTATTTCACCGCTTTCAATCAAAGACCGTAGGCATGTCAATTCCTAG 1104 0.394 MTISCWKPTVEGDVKGKIDGLLWYKDLGNHLYGEFSMAVIQANSSLEDRSQFESGPLSSDYLGPQGTFIGVYDGHGGTAAAQFVNDNLFSNFKSFAAEDQGVSEKVIRRAFSATDDAFLSLVKKQWLTKAQIASAGTCCLAGIICNGNLYIANAGDSRAVLGRARRGTKETLAVQLSVEHNVNIDTERDDVRSKHPYDPQIVVMKHSVWRVKGIIQVSRSIGDAYLKKAEFNREPLPLKFRLPETFFKPILSSEPSISVHKIQPEDQFLIFASDGLWEHLSNQTAVNIVSNSPRNGIARRLVKAALKEAAKKREIRFSDLQKIEQGVRRHFHDDITVIVVYLNPKLIDNGAQCISPLSIKDRRHVNS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04041 367 PANTHER PROTEIN PHOSPHATASE 32 341 IPR015655 GO:0004722|GO:0006470
Trre14g04041 367 SMART PP2C_4 28 340 IPR001932 -
Trre14g04041 367 FunFam Phosphatase 2C family protein 23 352 - -
Trre14g04041 367 SUPERFAMILY PP2C-like 43 343 IPR036457 -
Trre14g04041 367 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Trre14g04041 367 Pfam Protein phosphatase 2C 65 311 IPR001932 -
Trre14g04041 367 CDD PP2Cc 32 342 IPR001932 -
Trre14g04041 367 ProSiteProfiles PPM-type phosphatase domain profile. 31 342 IPR001932 -
Trre14g04041 367 Gene3D - 25 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04041 Trre-Chr14 49041154 49043490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04041 1 359 PP2C-type Phosphatase Gene Family AT3G12620 65.753 2.48e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04041 K01102 - gmx:100815902 570.852