Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04037 ATGGAAATCACCATTGTAGCTTGTGCTTTCTTTGTGATTTTCACAACATTTTTCAACCCTTCTTCTCTTGCTCTCACTCAAGATGGTCAAACGTTGTTGGAGATCAAAAACACTTTGAATGACACAGAATTTCTCTCAATAAATCTGCCATATATGCAGCTTGGGGGAATAATATCTCCCAGCATTGGTAAACTCAGTAGACTTCAGAGATTGGCACTTCATCAGAATGGCTTGCATGGAATCATTCCTACTGAGATTACCAATTGTACTGAGCTTAGAGCCCTGTACTTGAGGGCTAATTTCTTCCAGGGAGGGATACCAGCTGGCATCGGAAACCTTTCATTTTTAAATATATTGGATGTATCAAGCAATGGATTAAAAGGAGCTATTCCATCCTCTATTGGCCGTCTCTCAAATTTGCAAGTTTTGAACTTGTCTACCAATTTCTTTTCTGGTGAAATCCCTGACATTGGAGTACTAAGCATCTTCCAGAAGAACTCGTTTTTTGGCAATTCAGATCTTTGTGGAAGGCAAATACAAAAGCCATGTCGAACATCACTTGGTTTCCCTGTGGTGATACCACATGCCGAAAGCGACGAAGTTGCAGTCCCTACTACCAAAAGATCTTCACATTACATGAAGGCTGTGCTAATTGGGGCAGTGGCAACTTTGGGTATCGCACTTATCATAACCCTTTCATTACTCTTGATTCGTTCGACATCAAAGAAGGAAAGAGCTGCTAAGAAATACACAGAAGTCAAGAAGCAAGTTGATCCATCAGCAAGCGCTAAACTTATTACGTTCCATGGTGATATGCCATACACATCATCTGAAATCATAGAAAAGCTGGAGTCTCTAGATGAAGAGGATATAGTAGGGTCAGGAGGATTTGGTACTGTTTATCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGCGGATTGACCGAAGCCGGGAAGGGTCTGATCAAGTGTTTGAAAGGGAACTAGAGATCTTGGGCAGCATCAAGCACATAAATTTAGTAAATCTACGTGGTTACTGCAGGCTACCTTCTTCAAGGCTACTTATCTATGATTATGTGGCCTTAGGCAGCTTAGATGATCTCTTGCACGCAAATACTGAACGACAACCCTTGAATTGGAATGATCGGCTAAAGATAACCCTTGGTTCTGCCCGGGGTTTGGCATACTTGCACCATGAATGTTCCCCAAAAATTGTGCATCGTGACATAAAGTCTAGCAACATCCTTCTTAATGAAAACATGGAGCCTCACATCTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCACATGTTACCACGGTGGTAGCCGGCACATTTGGCTATTTGGCACCTGAGTATCTACAAAGTGGGAGAGCCACTGAGAAGTCAGATGTATACAGCTTTGGAGTTCTATTACTCGAACTTGTAACCGGAAAGAGGCCTACGGATCCTTCCTTTGTCAAGAGAGGTTTAAATGTTGTTGGCTGGATGAACACATTATTGAAAGAAAACAGATTGGAAGATGTGGTAGACAGAAGATGCAGTGGTGTCGATGCTGAAACTCTTGAAGTAATTTTGGAGCTAGCAGCAAGATGTACCGATTCAAATGCAGATGACCGTCCTTCGATGAATCAAGTATTGCAGTTGCTGGAACAAGAGGTCATGTCTCCTTGTCCAAGTGAATTTTACGAGTCCCATTCAGATCACTGA 1725 0.4191 MEITIVACAFFVIFTTFFNPSSLALTQDGQTLLEIKNTLNDTEFLSINLPYMQLGGIISPSIGKLSRLQRLALHQNGLHGIIPTEITNCTELRALYLRANFFQGGIPAGIGNLSFLNILDVSSNGLKGAIPSSIGRLSNLQVLNLSTNFFSGEIPDIGVLSIFQKNSFFGNSDLCGRQIQKPCRTSLGFPVVIPHAESDEVAVPTTKRSSHYMKAVLIGAVATLGIALIITLSLLLIRSTSKKERAAKKYTEVKKQVDPSASAKLITFHGDMPYTSSEIIEKLESLDEEDIVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYVALGSLDDLLHANTERQPLNWNDRLKITLGSARGLAYLHHECSPKIVHRDIKSSNILLNENMEPHISDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLLKENRLEDVVDRRCSGVDAETLEVILELAARCTDSNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04037 574 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Trre14g04037 574 Pfam Protein kinase domain 288 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04037 574 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 46 556 - -
Trre14g04037 574 SUPERFAMILY L domain-like 31 175 - -
Trre14g04037 574 ProSiteProfiles Protein kinase domain profile. 286 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04037 574 Gene3D Ribonuclease Inhibitor 25 185 IPR032675 -
Trre14g04037 574 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 36 183 - -
Trre14g04037 574 SMART serkin_6 286 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04037 574 Gene3D Transferase(Phosphotransferase) domain 1 363 565 - -
Trre14g04037 574 SUPERFAMILY Protein kinase-like (PK-like) 268 556 IPR011009 -
Trre14g04037 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Trre14g04037 574 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 362 567 - -
Trre14g04037 574 Gene3D Phosphorylase Kinase; domain 1 244 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04037 Trre-Chr14 48993901 48997645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04037 7 564 Receptor kinase-like Gene Family AT2G35620 47.359 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Trre14g04037 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04037 - - gmx:100797653 941.028