Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04036 ATGGAAATCACCATTGTAGCTTGTGCTTTCTTTGTGATTTTCACAACATTTTTCAACCCTTCTTCTCTTGCTCTCACTCAAGATGGTCAAACCAACTGGCAAGAGTTTGATGAATCTCATTGTGCATGGACTGGAATCTCGTGTCATCCTGGTGATGAACAAAGAGTTCTCTCAATAAATCTGCCATATATGCAGCTTGGGGGAATAATATCTCCCAGCATTGGTAAACTCAGTAGACTTCAGAGATTGGCACTTCATCAGAATGGCTTGCATGGAATCATTCCTACTGAGATTACCAATTGTACTGAGCTTAGAGCCCTGTACTTGAGGGCTAATTTCTTCCAGGGAGGGATACCAGCTGGCATCGGAAACCTTTCATTTTTAAATATATTGGATGTATCAAGCAATGGATTAAAAGGAGCTATTCCATCCTCTATTGGCCGTCTCTCAAATTTGCAAGTTTTGAACTTGTCTACCAATTTCTTTTCTGGTGAAATCCCTGACATTGGAGTACTAAGCATCTTCCAGAAGAACTCGTTTTTTGGCAATTCAGATCTTTGTGGAAGGCAAATACAAAAGCCATGTCGAACATCACTTGGTTTCCCTGTGGTGATACCACATGCCGAAAGCGACGAAGTTGCAGTCCCTACTACCAAAAGATCTTCACATTACATGAAGGCTGTGCTAATTGGGGCAGTGGCAACTTTGGGTATCGCACTTATCATAACCCTTTCATTACTCTTGATTCGTTCGACATCAAAGAAGGAAAGAGCTGCTAAGAAATACACAGAAGTCAAGAAGCAAGTTGATCCATCAGCAAGCGCTAAACTTATTACGTTCCATGGTGATATGCCATACACATCATCTGAAATCATAGAAAAGCTGGAGTCTCTAGATGAAGAGGATATAGTAGGGTCAGGAGGATTTGGTACTGTTTATCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGCGGATTGACCGAAGCCGGGAAGGGTCTGATCAAGTGTTTGAAAGGGAACTAGAGATCTTGGGCAGCATCAAGCACATAAATTTAGTAAATCTACGTGGTTACTGCAGGCTACCTTCTTCAAGGCTACTTATCTATGATTATGTGGCCTTAGGCAGCTTAGATGATCTCTTGCACGCAAATACTGAACGACAACCCTTGAATTGGAATGATCGGCTAAAGATAACCCTTGGTTCTGCCCGGGGTTTGGCATACTTGCACCATGAATGTTCCCCAAAAATTGTGCATCGTGACATAAAGTCTAGCAACATCCTTCTTAATGAAAACATGGAGCCTCACATCTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCACATGTTACCACGGTGGTAGCCGGCACATTTGGCTATTTGGCACCTGAGTATCTACAAAGTGGGAGAGCCACTGAGAAGTCAGATGTATACAGCTTTGGAGTTCTATTACTCGAACTTGTAACCGGAAAGAGGCCTACGGATCCTTCCTTTGTCAAGAGAGGTTTAAATGTTGTTGGCTGGATGAACACATTATTGAAAGAAAACAGATTGGAAGATGTGGTAGACAGAAGATGCAGTGGTGTCGATGCTGAAACTCTTGAAGTAATTTTGGAGCTAGCAGCAAGATGTACCGATTCAAATGCAGATGACCGTCCTTCGATGAATCAAGTATTGCAGTTGCTGGAACAAGAGGTCATGTCTCCTTGTCCAAGTGAATTTTACGAGTCCCATTCAGATCACTGA 1761 0.4219 MEITIVACAFFVIFTTFFNPSSLALTQDGQTNWQEFDESHCAWTGISCHPGDEQRVLSINLPYMQLGGIISPSIGKLSRLQRLALHQNGLHGIIPTEITNCTELRALYLRANFFQGGIPAGIGNLSFLNILDVSSNGLKGAIPSSIGRLSNLQVLNLSTNFFSGEIPDIGVLSIFQKNSFFGNSDLCGRQIQKPCRTSLGFPVVIPHAESDEVAVPTTKRSSHYMKAVLIGAVATLGIALIITLSLLLIRSTSKKERAAKKYTEVKKQVDPSASAKLITFHGDMPYTSSEIIEKLESLDEEDIVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYVALGSLDDLLHANTERQPLNWNDRLKITLGSARGLAYLHHECSPKIVHRDIKSSNILLNENMEPHISDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLLKENRLEDVVDRRCSGVDAETLEVILELAARCTDSNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04036 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Trre14g04036 586 ProSiteProfiles Protein kinase domain profile. 298 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04036 586 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 374 579 - -
Trre14g04036 586 SMART serkin_6 298 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04036 586 Gene3D Phosphorylase Kinase; domain 1 256 373 - -
Trre14g04036 586 SUPERFAMILY Protein kinase-like (PK-like) 280 568 IPR011009 -
Trre14g04036 586 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 18 172 - -
Trre14g04036 586 SUPERFAMILY L domain-like 22 170 - -
Trre14g04036 586 Gene3D Transferase(Phosphotransferase) domain 1 375 577 - -
Trre14g04036 586 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 62 568 - -
Trre14g04036 586 Gene3D Ribonuclease Inhibitor 17 197 IPR032675 -
Trre14g04036 586 Pfam Protein kinase domain 300 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04036 586 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04036 Trre-Chr14 48993901 48997645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04036 25 576 Receptor kinase-like Gene Family AT2G35620 50.633 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Trre14g04036 Pkinase 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04036 - - gmx:100797653 982.245