Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04021 ATGCTGCAGGGTATAGTTTGTTCAGGAATGGCCTATTACATCCAAGGAGCAGTAATGAGATATAGAGGTCCAGTTTTTGTAACAACTTTCAATCCACTCTGCATGGTCATTGTAGCTATCATGGGATCCTTCTTTTTGGCCGAGAAAATTTACCTCGGAAGGGTGATCGGCGCCGTCGTGATTATTTTTGGATTGTATTTAGTGGTATGGGGTAAAAGTAAAGATTATGACACACCAAATCCAAATATTGAAGATGAAATATTACCAGCTAAGCAAACTATAGAGATTAATGACAAAGAGGAGCATCTTAATCATGAGGTCATGATCACTAGCAAAAACTTTGGTGAAGGAAATAACATAGCAAGAGATGAACAAGTGTGA 381 0.3832 MLQGIVCSGMAYYIQGAVMRYRGPVFVTTFNPLCMVIVAIMGSFFLAEKIYLGRVIGAVVIIFGLYLVVWGKSKDYDTPNPNIEDEILPAKQTIEINDKEEHLNHEVMITSKNFGEGNNIARDEQV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04021 126 Pfam EamA-like transporter family 3 69 IPR000620 GO:0016020
Trre14g04021 126 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 74 - -
Trre14g04021 126 PANTHER WAT1-RELATED PROTEIN 3 76 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04021 Trre-Chr14 48898818 48899290 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04021 3 121 Nodulin-like Gene Family AT2G37460 53.333 6.58e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04021 - - gmx:100777050 173.711