Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04019 ATGGGATATTGTAACCAAAAAAAGTATGAAGCTTGGAAACCATTCATAGCTGTTGTGTTCTTGCAATTTGGATATGCTGGTATGGATGTTCTATCAAAAGCTGCACTTAACAAAGGAATGAGCAATTATGTACTCGTCGTTTATCGTCACGCCGTTGCCTTCATTGTGATTGTTCCTTTTGCAATCATCTTAGAAAAGAAAGTAAGGCCAAAGATGACATTTTCAATCTTTATGAAGCTAGTGATTCTCAGTGTGCTAGAGCCAGTGATTGATCAAAATTTATATTTTTTGGGAATGAAGTATACAACAGCTACTTTTGCAGTTGCTATGTTCAATGTCCTTCCTGCCATTACCTTTGTGGTGGCTTGGATTCTCAAGCTTGAGAAGATAAACATGAAAAGTGTACATAGTCAAGCAAAGATTGTTGGGACAGTAGCCACTGTTGTAGGTGCAATGCTTATGACATTGTTAAAAGGTCCAATACTTAATATTTTTGGAATACATGGAAGCAGTGCTCAAATCCAACATAATAGTGGTGCAAATCTTCAACATGCAATAAAGGGATCAATTATGATCACAATTGGTTGTCTTAGTTGTGCTTGTTTTATGATTCTCCAAGCTATAACACTTGAAACCTATCCTGCTGAGTTATCTCTTACAGCATGGATATGTCTATTGGGAACAATAGAAGGTGGCATAGTAGCTTTGATTATGGAAAGGGGTCAACCTTCAGTTTGGTCTTTGAATTGGGATACAAAACTATTGGCTGCGGTTTATAGTGGTATAGTTTGTTCAGGAATGGCCTATTACATCCAAGGAGCAGTAATGAGATATAGAGGTCCAGTTTTTGTAACAACTTTCAATCCACTCTGCATGGTCATTGTAGCTATCATGGGATCCTTCTTTTTGGCCGAGAAAATTTACCTCGGAAGGGTGATCGGCGCCGTCGTGATTATTTTTGGATTGTATTTAGTGGTATGGGGTAAAAGTAAAGATTATGACACACCAAATCCAAATATTGAAGATGAAATATTACCAGCTAAGCAAACTATAGAGATTAATGACAAAGAGGAGCATCTTAATCATGAGGTCATGATCACTAGCAAAAACTTTGGTGAAGGAAATAACATAGCAAGAGATGAACAAGTGTGA 1152 0.3733 MGYCNQKKYEAWKPFIAVVFLQFGYAGMDVLSKAALNKGMSNYVLVVYRHAVAFIVIVPFAIILEKKVRPKMTFSIFMKLVILSVLEPVIDQNLYFLGMKYTTATFAVAMFNVLPAITFVVAWILKLEKINMKSVHSQAKIVGTVATVVGAMLMTLLKGPILNIFGIHGSSAQIQHNSGANLQHAIKGSIMITIGCLSCACFMILQAITLETYPAELSLTAWICLLGTIEGGIVALIMERGQPSVWSLNWDTKLLAAVYSGIVCSGMAYYIQGAVMRYRGPVFVTTFNPLCMVIVAIMGSFFLAEKIYLGRVIGAVVIIFGLYLVVWGKSKDYDTPNPNIEDEILPAKQTIEINDKEEHLNHEVMITSKNFGEGNNIARDEQV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04019 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
Trre14g04019 383 PANTHER WAT1-RELATED PROTEIN 13 333 IPR030184 GO:0016020|GO:0022857
Trre14g04019 383 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Trre14g04019 383 Pfam EamA-like transporter family 16 154 IPR000620 GO:0016020
Trre14g04019 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04019 Trre-Chr14 48876344 48879206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04019 10 378 Nodulin-like Gene Family AT2G37460 62.803 6.50e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04019 - - gmx:100806461 586.26