Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04000 ATGAACCCTATCAACACCGTTTTCGATGCTAAGAGGGGTGTTCCCCAGATCACTGTTTGCTTTGACATTGATGCCAATGGTATCTTGAATGTCTCTGCTGAAGATAAGACTACCGGACAGAAGAATAAGATTACCATCACCAATGACAAGGGTAGGTTGTCAAAGGAAGATATTGAGAAGATGGTTCAAGAGGCTGAAAAGTACAAGTCTGAGGATGAAGAGCATAAGAAGAAGGTGGAGGCCAAGAATGCATTGGAAAATTATGCATACAACATGAGGAACACCATTAAGGATGATAAGATTGCCGGTAAACTTGATTCCGAAGACAAGAAGAAGATTGAGGACACCATTGAAGCAGCTATCCAGTGGCTAGACGCCAACCAGCTTGCAGAGGCTGATGAGTTTGAGGACAAGATGAAAGAATTGGAAAGTGTCTGCAACCCTATCATTGCCAAGATGTACCAAGGTGGTGCTGGTCCTGACATGGGTGCTGCAGCAGATGATGATGCTCCTTCTGGTGCAGGTGGTGCTGGTCCTAAGATTGAGGAAGTTGACTAA 558 0.4462 MNPINTVFDAKRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIAGKLDSEDKKKIEDTIEAAIQWLDANQLAEADEFEDKMKELESVCNPIIAKMYQGGAGPDMGAAADDDAPSGAGGAGPKIEEVD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04000 185 Pfam Hsp70 protein 6 155 IPR013126 GO:0005524|GO:0140662
Trre14g04000 185 FunFam Heat shock 70 kDa protein 76 185 - -
Trre14g04000 185 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 7 86 IPR029047 -
Trre14g04000 185 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 80 161 IPR029048 -
Trre14g04000 185 Gene3D - 76 185 IPR029048 -
Trre14g04000 185 FunFam Protein CBG18239 25 81 - -
Trre14g04000 185 Coils Coil 58 78 - -
Trre14g04000 185 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 4 69 IPR029047 -
Trre14g04000 185 PANTHER HEAT SHOCK PROTEIN 70KDA 10 119 IPR013126 GO:0005524|GO:0140662
Trre14g04000 185 MobiDBLite consensus disorder prediction 156 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04000 Trre-Chr14 48614019 48616558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04000 10 185 Calmodulin-binding Proteins AT5G02490 83.425 2.85e-95 288