Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03969 ATGCTGCCGTCGGTCATGTTCCTCTTTGCTCTTCTTAACTTACTATTCTCTTCTCAAGGCTCTCTGTGTGCAGCGGAGTCATTTTCCCTGAGTGTGCGGTTTGCTTCATTGGAACAAACTAAATTTTGGTTAGTTAAGCCTTCTTCTGGACCAATTTCTGCACCCGTGCCATCTCCATCCTATCAAGGTCCTAGTGTGGCTCCAAGACATAAACATCATCATCGTCACCGACACCATCATAGCATGAGACCATATATAGGGGCTCCACCCCCTTCCACAGACCAAGCTTGCGATCAAATATGTACGGATCCTCTCACATCAACTCCCTTTGGTTCACCTTGTGGCTGTGTATTTCCTATGAAAGTCAGACTTACACTGGATGTAGCTCCTTATGCTGTTTTTCCAGTAATGACAGAGTTAGAGCATGAAGTTGCGCTAGGCACATATTTAGAACAGAGTCAGGTGGTGATAATGGGTGCAACTGCTGACAGTCAAAATCAGGGAAGAACTATTGTTGATATTAACTTGGTTCCATTGGGAGAAAAATTTGACAACACAACTGCAGCCCTGACATACGAGAGGTTTTGGCACAAAAAAGTTCCTCTAAATAGGAGCATATTTGGTGATTATGCTGTCGTGAACATTACATATCCAGGAATTCCATCTTCGCCACCATATGAAACTTCAATTGGAAGCGGTCCCAGTCAAAATGCTGATGGTAGTCTGCCATTCAGCGCCGATTTTGCTAGCAAGAACCAGAAAACGAATCTTAGAACCATAATCATCATTGCTTTGTCTTCTTTTGTGCTCTTGCTGGTTTTGGTTGCAGCATTTTCTGTTGCTTTGAAATGGAGGAAGACTAGGGGACCATCAAGTGCTGTTGGCCCAGCATTTACATCTTCTCTAAACAAGAGATCTGGTTTGGGGTCTGTGTTGTCAAGCAGTATTACAAGCTCGACATCAGTGTCCCTCATGTCCACAATGCCCACTTCCATTCTCTCTGTTAAAACATTTTCACTTTCTGAGATTGAGAAAGCAACAGATAAGTTTAATTCAAAGAGAGTATTAGGGGAAGGGGGATTTGGACGTGTGTATAGTGGGACATTGGAAGATGGGGCTGAAGTTGCAGTGAAGCTCCTTACAAGAGATAATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGTTAAGCCGTTTACATCATCGTAATCTAGTGAAACTTATTGGAATATGCATTGAAGGGCGCAAGCGTTGCCTGGTATATGAGCTAGTTCCTAATGGCAGTGTGGAGTCCCATCTGCATGGTGATGACAAGAATAGGGGACCTCTAGATTGGGAAGCACGAATGAAAATTGCCCTTGGAGCTGCGAGAGGATTGGCCTATCTTCACGAGGATTCTAATCCCCGTGTAATTCATCGGGACTTCAAAGCCAGCAATGTGCTATTAGAAGACGACTTTACCCCTAAAGTTTCTGATTTTGGTTTGGCAAGAGAAGCAACTGAAGGAAGTAATCATATTTCTACACGGGTGATGGGGACTTTCGGGTATGTTGCCCCAGAATATGCAATGACGGGCCATTTACTGGTTAAAAGTGATGTTTATAGTTATGGCGTTGTGCTTCTTGAACTTCTCACAGGCAGAAAACCAGTCGATATGTCTCAACCCCAGGGACAGGAGAATCTTGTAACTTGGGCACGGTCACTGTTGACTAGCAGAGAAGGTTTAGAACAGCTAGTGGATCCATCTTTGGCCGGAAGTTACAACTTCGATGACATGGCAAAGGTAGCAGCTATTGCGTCAATGTGTGTTCACTCCGAGGTCACACAGAGACCTTTTATGGGTGAAGTAGTGCAGGCTCTTAAATTGATATACAATGACACTGATGAGACTGGTGGAGATTATTGTAGTCAGAAGGACTCCTCTGCTCAGGAGTCTGATTTTAGAGGCGAGCTTGCCCCTTCTGATAGCAGTTGGTGGAACGGTGGAGGGTTAACGCCTCGATTAACTTATGGACAGGCATCTTCCTTCATCACGATGGAATACAGTTCTGGTCCACTTGAAGATATGGAAAACAGACCGTTTTCAACTTCAAGCTTTAATGGAGATGAGCTATCTTTACCAATTAGGCATGGGAATAGATCAGGTCCCTTGAGAACAATTCGAAGCAAGTTATCCTTATATAGATTTTCTGGAAGTCGGAGTGAACACGGGGAACTTTCTTCCAAGCGAAATTGGATATGA 2250 0.4382 MLPSVMFLFALLNLLFSSQGSLCAAESFSLSVRFASLEQTKFWLVKPSSGPISAPVPSPSYQGPSVAPRHKHHHRHRHHHSMRPYIGAPPPSTDQACDQICTDPLTSTPFGSPCGCVFPMKVRLTLDVAPYAVFPVMTELEHEVALGTYLEQSQVVIMGATADSQNQGRTIVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSIFGDYAVVNITYPGIPSSPPYETSIGSGPSQNADGSLPFSADFASKNQKTNLRTIIIIALSSFVLLLVLVAAFSVALKWRKTRGPSSAVGPAFTSSLNKRSGLGSVLSSSITSSTSVSLMSTMPTSILSVKTFSLSEIEKATDKFNSKRVLGEGGFGRVYSGTLEDGAEVAVKLLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRKRCLVYELVPNGSVESHLHGDDKNRGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARSLLTSREGLEQLVDPSLAGSYNFDDMAKVAAIASMCVHSEVTQRPFMGEVVQALKLIYNDTDETGGDYCSQKDSSAQESDFRGELAPSDSSWWNGGGLTPRLTYGQASSFITMEYSSGPLEDMENRPFSTSSFNGDELSLPIRHGNRSGPLRTIRSKLSLYRFSGSRSEHGELSSKRNWI 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03969 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Trre14g03969 749 Pfam Protein tyrosine and serine/threonine kinase 352 623 IPR001245 GO:0004672|GO:0006468
Trre14g03969 749 PANTHER OS01G0750732 PROTEIN 89 644 - -
Trre14g03969 749 Gene3D Phosphorylase Kinase; domain 1 321 426 - -
Trre14g03969 749 MobiDBLite consensus disorder prediction 67 83 - -
Trre14g03969 749 MobiDBLite consensus disorder prediction 49 84 - -
Trre14g03969 749 ProSiteProfiles Protein kinase domain profile. 350 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03969 749 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Trre14g03969 749 SUPERFAMILY Protein kinase-like (PK-like) 327 626 IPR011009 -
Trre14g03969 749 Gene3D Transferase(Phosphotransferase) domain 1 427 648 - -
Trre14g03969 749 CDD STKc_IRAK 356 626 - -
Trre14g03969 749 FunFam Receptor-like serine/threonine-protein kinase ALE2 427 645 - -
Trre14g03969 749 FunFam receptor-like serine/threonine-protein kinase ALE2 323 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03969 Trre-Chr14 48166373 48172689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03969 100 632 Receptor kinase-like Gene Family AT5G56890 61.172 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre14g03969 PK_Tyr_Ser-Thr 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03969 - - gmx:100792309 1262.67