Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03958 ATGGGAGATCAAGAGAAAGGGAAAGAGCTAATGGAGCCTCAAAATTCGGAAACCAAATTAACAGCACTTGTTGTAGATGATGATAAGCTTGTCCGAATGATTCATCAAGGTCTGTTGAAAAGAGCTGGTGTGAAGAATGAGGCTGTGAAAAATGGTAAAGAAGCTGTAGATATTCATTACAGTGGTCAAAGATTTGATATTATTCTCATGGATAAGGAAATGCCAATCATGACTGGGATTGAGGCAACCAAGAAACTGCGATCAATGGGCATAGTTAGCAGGATTGTTGGTGTGTCGTCGTGTACAGAAGCAGAAAAACAAGAATTCATGAAAGCAGGGATAGATGACTATCAAGTGAAACCACTGACTTTTGGTGTGCTTAATTCGATTCTTGATGTTGTAAAAGCTAGCAAGTAG 417 0.3933 MGDQEKGKELMEPQNSETKLTALVVDDDKLVRMIHQGLLKRAGVKNEAVKNGKEAVDIHYSGQRFDIILMDKEMPIMTGIEATKKLRSMGIVSRIVGVSSCTEAEKQEFMKAGIDDYQVKPLTFGVLNSILDVVKASK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03958 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 134 - -
Trre14g03958 138 SMART REC_2 20 131 IPR001789 GO:0000160
Trre14g03958 138 Pfam Response regulator receiver domain 23 129 IPR001789 GO:0000160
Trre14g03958 138 ProSiteProfiles Response regulatory domain profile. 21 135 IPR001789 GO:0000160
Trre14g03958 138 CDD REC_hyHK_CKI1_RcsC-like 23 131 - -
Trre14g03958 138 SUPERFAMILY CheY-like 19 134 IPR011006 -
Trre14g03958 138 Gene3D - 2 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03958 Trre-Chr14 48094800 48095399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03958 20 132 Response Regulator Gene Family AT3G04280 44.167 8.57e-27 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre14g03958 Response_reg 2.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03958 - - cam:101506170 187.963