Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre14g03942 | ATGAAGAAGAAAAAAATGCAGATGAAAACCAAGTTTTTCATATTCTTCTGTTACATTGTAATTTTTTGTTTCTCTTATAGTTTTTCTGCTGCTTCAAATGATGAAGTATCAGCTTTGCTTTCTATAAAATCAGGTCTTATTGATCCTTTAAACAGTCTTCATGATTGGAAGTTGGATGCAGATCATTGTAATTGGATCGGCGTCGAATGCAACTCGGCCGGAACCGTAGAGAATCTTGATCTTTCTCACAAGAATCTCAGTGGTATAGTATCCAATGATATACAAAAACTTCAAAATCTTACTTCTCTTAACTTATGTTGCAATGCATTTTCATCACCTTTTCCAAAATCTATAGTAAATCTTACCACATTGAACATTCTTGATGTAAGTCAGAATTTCTTCATTGGTGAATTTCCATTTGGATTTGGAAAGGCGTTGAAACTCGCGAGCTTAAATGTTTCGAGCAATGAGTTCACAGGTTTGATTCCTGTGGACATTGGAAATGTAACTTCATTAGAAATGCTTGATCTTAGAGGCAGTTTCTTTGAAGGTTCAATTCCGAAATCCTTCGGAAACTTGCATAAGTTGAAGTTTCTTGGTTTATCTGGGAATAATCTCACTGGAAAAATTCCTGGTGAGCTTGGAAAACTTTCATCATTGGAGTATATGATTGTTGGATATAACGAATTCGAAGGTGAGATTCCATCGGAATTTGGAAATCTTACTAGTCTAAAGTATCTTGATTTAGCAGTTTCAAATCTTGGTGGTGAGATTCCAAATGAATTAGGAAATCTTAAGTTATTGGATACACTTTTCTTATATAACAACAATTTTGAAGGAAGAATTCCATCACAGATTGGTAACATTACTTCTTTGAAGTTTTTGGATTTTTCTGATAACAATTTGTCAGGAAAAATTCCAGATGAAATGAGTCTGCTGAAGAGTTTGAAGCTTCTGAATTTCATGGGAAATAAGTTATCTGGTTTTGTTCCTTCTGGAATTGGTAACTTACCTCAACTAGAGGTTCTTGAGCTATGGAACAATTCATTATCAGGTCCATTGCCTAGTAACCTCGGCGAGAATTCACCGTTGCAATGGTTGGATGTATCATCCAATTCACTCTCTGGTGAGATTCCAGAAACTCTTTGCAGGAAAGGAAATCTCACTAAGCTCATACTTTTCAACAATGCTTTCTCCGGTCCAATTCCATCAAGCCTATCGACGTGTTCTTCACTTGTTCGTGTTCGAATTCACAACAATTTACTTTCTGGTAAAGTTCCTGTTGGTCTTGGCAAGCTTGAGAAGCTTCAAAGGTTAGAATTAGCTAATAATAGTCTCACTGGTGAAATTCCAGATGATATTCCTTCTTCCGCGTCGCTATCTTTCATTGATCTCTCAAGAAATAAACTTCATTCTTCTCTACCTTCCACCATTCTTTCCATTTCAAATCTTCAAGTTTTCATGGTCTCACACAACAACTTAGAAGGTAAAATCCCTGACCAATTTCAGGACTCTCCCTCACTTACTGTTCTTGATCTCTCATCGAATCATTTGTCCGGAACCATTCCAGAAAGCATAGGTTCATGTCAAAAATTAGTAAATTTGAACCTTCAAAATAACCTTTTGATTGGTGAAATTCCAAAAACATTAGCTAACATGCCTACATTAGCCATGCTTGATCTTTCCAACAATTCGTTGACCGGTCATATACCTGAAAACTTTGGTTCATCACCAGCTCTTGAAGCATTTAATGTCTCATACAACAAGCTTGAAGGTTCTGTACCAGAAAATGGTATGCTAAGAACTATAAACCCGAATAATCTCGTCGGAAATGATGGCCTATGTGGTGGTATCCTCCCTTCATGTGATCAAAACTCAGCATACTCCTCAAGGCATGGAAGTTCACATGAAAAGCACATAATCACAGGATGGATTATTGGAATATCATCAATTCTAGCCATTGGAATTACAATTTTGGTAGCAAGATCTTTATACGTAAGGTGGTACACCGGCGGTTTTTGCTTCAGAGAGAGATTTTATAAAGGTAGCAAAGGGTGGCCATGGAGATTGATGGCATTTCAGAGACTTGGTTTCACAAGCACTGACATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGAATGGGAGGTACCGGCGTTGTTTACAAGGCCGAGGTACCGCATTCTAACACAGTTGTGGCAGTGAAAAAGTTATGGAGATCAGGAAATGATGTTGAAGTAGGAGGAGGAGGCAGTGATGAACTTGTTGGAGAGGTGAACCTTTTAGGAAGATTAAGACACAGGAACATTGTTAGATTATTAGGGTTTCTTCATAATGACACTGATTTGATGATAGTTTATGAATTTATGCCTAATGGAAACCTTGGAGATGCCTTGCATGGTAAGCAAGCAGTTAGACAGCTTGTGGATTGGGTTTCAAGATATAAAATAGCTTTAGGAGTTGCTCAAGGACTTGCTTATCTTCACCATGACTGTTATCCACCGGTTATTCATCGCGACATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGGTTGGCCAAGATGATGGTCCGAAAGAATGAAACGGTCTCCATGGTTGCTGGTTCTTATGGCTACATTGCTCCTGAATATGGATATGCATTGAAGGTGGATGAAAAGATTGATGTATACAGTTATGGAGTAGTTTTACTAGAGCTTCTAACAGGAAAGAGGCCATTAGATTCAGAATTTGGAGAAAGTGTAGACATTGTAGAATGGATTAGAAGGAAGATTAGAGATAACAAATCTCTAGAAGAAGCATTAGATCCAAGTGTAGGAAACTGCAGACATGTTATAGAAGAGATGCTTTTAGTTTTAAGAATAGCAGTTATTTGCACTGCTAAGCTTCCTAAAGAAAGACCAAGTATGAGAGATGTGATAATGATGCTTGGAGAGGCAAAACCAAGAAGAAAAATCAGTGGCAACAATGAAACATCTTTAGCAGCTAACAACAATAACAAGGAGATGTCAGTTTTTAGCACATCACCAGTTAGTGGCCTTCTTTAG | 3072 | 0.3747 | MKKKKMQMKTKFFIFFCYIVIFCFSYSFSAASNDEVSALLSIKSGLIDPLNSLHDWKLDADHCNWIGVECNSAGTVENLDLSHKNLSGIVSNDIQKLQNLTSLNLCCNAFSSPFPKSIVNLTTLNILDVSQNFFIGEFPFGFGKALKLASLNVSSNEFTGLIPVDIGNVTSLEMLDLRGSFFEGSIPKSFGNLHKLKFLGLSGNNLTGKIPGELGKLSSLEYMIVGYNEFEGEIPSEFGNLTSLKYLDLAVSNLGGEIPNELGNLKLLDTLFLYNNNFEGRIPSQIGNITSLKFLDFSDNNLSGKIPDEMSLLKSLKLLNFMGNKLSGFVPSGIGNLPQLEVLELWNNSLSGPLPSNLGENSPLQWLDVSSNSLSGEIPETLCRKGNLTKLILFNNAFSGPIPSSLSTCSSLVRVRIHNNLLSGKVPVGLGKLEKLQRLELANNSLTGEIPDDIPSSASLSFIDLSRNKLHSSLPSTILSISNLQVFMVSHNNLEGKIPDQFQDSPSLTVLDLSSNHLSGTIPESIGSCQKLVNLNLQNNLLIGEIPKTLANMPTLAMLDLSNNSLTGHIPENFGSSPALEAFNVSYNKLEGSVPENGMLRTINPNNLVGNDGLCGGILPSCDQNSAYSSRHGSSHEKHIITGWIIGISSILAIGITILVARSLYVRWYTGGFCFRERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGGTGVVYKAEVPHSNTVVAVKKLWRSGNDVEVGGGGSDELVGEVNLLGRLRHRNIVRLLGFLHNDTDLMIVYEFMPNGNLGDALHGKQAVRQLVDWVSRYKIALGVAQGLAYLHHDCYPPVIHRDIKSNNILLDANLEARIADFGLAKMMVRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDSEFGESVDIVEWIRRKIRDNKSLEEALDPSVGNCRHVIEEMLLVLRIAVICTAKLPKERPSMRDVIMMLGEAKPRRKISGNNETSLAANNNNKEMSVFSTSPVSGLL | 1023 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre14g03942 | 1023 | Pfam | Protein kinase domain | 709 | 981 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre14g03942 | 1023 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 282 | 365 | - | - | |
Trre14g03942 | 1023 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 32 | 180 | - | - | |
Trre14g03942 | 1023 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 836 | 848 | IPR008271 | GO:0004672|GO:0006468 | |
Trre14g03942 | 1023 | SUPERFAMILY | L domain-like | 57 | 326 | - | - | |
Trre14g03942 | 1023 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 181 | 281 | - | - | |
Trre14g03942 | 1023 | Gene3D | Phosphorylase Kinase; domain 1 | 699 | 789 | - | - | |
Trre14g03942 | 1023 | Gene3D | Transferase(Phosphotransferase) domain 1 | 790 | 1012 | - | - | |
Trre14g03942 | 1023 | MobiDBLite | consensus disorder prediction | 995 | 1023 | - | - | |
Trre14g03942 | 1023 | Gene3D | Ribonuclease Inhibitor | 180 | 282 | IPR032675 | - | |
Trre14g03942 | 1023 | SUPERFAMILY | RNI-like | 258 | 604 | - | - | |
Trre14g03942 | 1023 | Gene3D | Ribonuclease Inhibitor | 283 | 383 | IPR032675 | - | |
Trre14g03942 | 1023 | Pfam | Leucine rich repeat | 531 | 590 | IPR001611 | GO:0005515 | |
Trre14g03942 | 1023 | Pfam | Leucine rich repeat | 460 | 518 | IPR001611 | GO:0005515 | |
Trre14g03942 | 1023 | Pfam | Leucine rich repeat | 172 | 229 | IPR001611 | GO:0005515 | |
Trre14g03942 | 1023 | Gene3D | Ribonuclease Inhibitor | 31 | 179 | IPR032675 | - | |
Trre14g03942 | 1023 | FunFam | MDIS1-interacting receptor like kinase 1 | 707 | 793 | - | - | |
Trre14g03942 | 1023 | PANTHER | UNNAMED PRODUCT | 172 | 918 | - | - | |
Trre14g03942 | 1023 | Pfam | Leucine rich repeat N-terminal domain | 33 | 71 | IPR013210 | - | |
Trre14g03942 | 1023 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 366 | 626 | - | - | |
Trre14g03942 | 1023 | Gene3D | Ribonuclease Inhibitor | 385 | 626 | IPR032675 | - | |
Trre14g03942 | 1023 | SMART | LRR_typ_2 | 193 | 217 | IPR003591 | - | |
Trre14g03942 | 1023 | SMART | LRR_typ_2 | 506 | 529 | IPR003591 | - | |
Trre14g03942 | 1023 | SMART | LRR_typ_2 | 481 | 504 | IPR003591 | - | |
Trre14g03942 | 1023 | SMART | LRR_typ_2 | 433 | 457 | IPR003591 | - | |
Trre14g03942 | 1023 | SMART | LRR_typ_2 | 337 | 361 | IPR003591 | - | |
Trre14g03942 | 1023 | SMART | LRR_typ_2 | 553 | 577 | IPR003591 | - | |
Trre14g03942 | 1023 | SMART | LRR_typ_2 | 289 | 313 | IPR003591 | - | |
Trre14g03942 | 1023 | SMART | LRR_typ_2 | 241 | 265 | IPR003591 | - | |
Trre14g03942 | 1023 | SMART | serkin_6 | 707 | 985 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre14g03942 | 1023 | SUPERFAMILY | Protein kinase-like (PK-like) | 703 | 985 | IPR011009 | - | |
Trre14g03942 | 1023 | ProSitePatterns | Protein kinases ATP-binding region signature. | 713 | 737 | IPR017441 | GO:0005524 | |
Trre14g03942 | 1023 | FunFam | MDIS1-interacting receptor like kinase 1 | 794 | 1004 | - | - | |
Trre14g03942 | 1023 | ProSiteProfiles | Leucine-rich repeat profile. | 291 | 313 | IPR001611 | GO:0005515 | |
Trre14g03942 | 1023 | ProSiteProfiles | Protein kinase domain profile. | 707 | 992 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre14g03942 | 1023 | PRINTS | Leucine-rich repeat signature | 508 | 521 | - | - | |
Trre14g03942 | 1023 | PRINTS | Leucine-rich repeat signature | 553 | 566 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre14g03942 | Trre-Chr14 | 47928939 | 47932329 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre14g03942 | 11 | 1023 | Receptor kinase-like Gene Family | AT1G08590 | 57.971 | 0.0 | 1154 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Trre14g03942 | Pkinase | 4.1e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre14g03942 | - | - | gmx:100811284 | 1635.93 |