Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03942 ATGAAGAAGAAAAAAATGCAGATGAAAACCAAGTTTTTCATATTCTTCTGTTACATTGTAATTTTTTGTTTCTCTTATAGTTTTTCTGCTGCTTCAAATGATGAAGTATCAGCTTTGCTTTCTATAAAATCAGGTCTTATTGATCCTTTAAACAGTCTTCATGATTGGAAGTTGGATGCAGATCATTGTAATTGGATCGGCGTCGAATGCAACTCGGCCGGAACCGTAGAGAATCTTGATCTTTCTCACAAGAATCTCAGTGGTATAGTATCCAATGATATACAAAAACTTCAAAATCTTACTTCTCTTAACTTATGTTGCAATGCATTTTCATCACCTTTTCCAAAATCTATAGTAAATCTTACCACATTGAACATTCTTGATGTAAGTCAGAATTTCTTCATTGGTGAATTTCCATTTGGATTTGGAAAGGCGTTGAAACTCGCGAGCTTAAATGTTTCGAGCAATGAGTTCACAGGTTTGATTCCTGTGGACATTGGAAATGTAACTTCATTAGAAATGCTTGATCTTAGAGGCAGTTTCTTTGAAGGTTCAATTCCGAAATCCTTCGGAAACTTGCATAAGTTGAAGTTTCTTGGTTTATCTGGGAATAATCTCACTGGAAAAATTCCTGGTGAGCTTGGAAAACTTTCATCATTGGAGTATATGATTGTTGGATATAACGAATTCGAAGGTGAGATTCCATCGGAATTTGGAAATCTTACTAGTCTAAAGTATCTTGATTTAGCAGTTTCAAATCTTGGTGGTGAGATTCCAAATGAATTAGGAAATCTTAAGTTATTGGATACACTTTTCTTATATAACAACAATTTTGAAGGAAGAATTCCATCACAGATTGGTAACATTACTTCTTTGAAGTTTTTGGATTTTTCTGATAACAATTTGTCAGGAAAAATTCCAGATGAAATGAGTCTGCTGAAGAGTTTGAAGCTTCTGAATTTCATGGGAAATAAGTTATCTGGTTTTGTTCCTTCTGGAATTGGTAACTTACCTCAACTAGAGGTTCTTGAGCTATGGAACAATTCATTATCAGGTCCATTGCCTAGTAACCTCGGCGAGAATTCACCGTTGCAATGGTTGGATGTATCATCCAATTCACTCTCTGGTGAGATTCCAGAAACTCTTTGCAGGAAAGGAAATCTCACTAAGCTCATACTTTTCAACAATGCTTTCTCCGGTCCAATTCCATCAAGCCTATCGACGTGTTCTTCACTTGTTCGTGTTCGAATTCACAACAATTTACTTTCTGGTAAAGTTCCTGTTGGTCTTGGCAAGCTTGAGAAGCTTCAAAGGTTAGAATTAGCTAATAATAGTCTCACTGGTGAAATTCCAGATGATATTCCTTCTTCCGCGTCGCTATCTTTCATTGATCTCTCAAGAAATAAACTTCATTCTTCTCTACCTTCCACCATTCTTTCCATTTCAAATCTTCAAGTTTTCATGGTCTCACACAACAACTTAGAAGGTAAAATCCCTGACCAATTTCAGGACTCTCCCTCACTTACTGTTCTTGATCTCTCATCGAATCATTTGTCCGGAACCATTCCAGAAAGCATAGGTTCATGTCAAAAATTAGTAAATTTGAACCTTCAAAATAACCTTTTGATTGGTGAAATTCCAAAAACATTAGCTAACATGCCTACATTAGCCATGCTTGATCTTTCCAACAATTCGTTGACCGGTCATATACCTGAAAACTTTGGTTCATCACCAGCTCTTGAAGCATTTAATGTCTCATACAACAAGCTTGAAGGTTCTGTACCAGAAAATGGTATGCTAAGAACTATAAACCCGAATAATCTCGTCGGAAATGATGGCCTATGTGGTGGTATCCTCCCTTCATGTGATCAAAACTCAGCATACTCCTCAAGGCATGGAAGTTCACATGAAAAGCACATAATCACAGGATGGATTATTGGAATATCATCAATTCTAGCCATTGGAATTACAATTTTGGTAGCAAGATCTTTATACGTAAGGTGGTACACCGGCGGTTTTTGCTTCAGAGAGAGATTTTATAAAGGTAGCAAAGGGTGGCCATGGAGATTGATGGCATTTCAGAGACTTGGTTTCACAAGCACTGACATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGAATGGGAGGTACCGGCGTTGTTTACAAGGCCGAGGTACCGCATTCTAACACAGTTGTGGCAGTGAAAAAGTTATGGAGATCAGGAAATGATGTTGAAGTAGGAGGAGGAGGCAGTGATGAACTTGTTGGAGAGGTGAACCTTTTAGGAAGATTAAGACACAGGAACATTGTTAGATTATTAGGGTTTCTTCATAATGACACTGATTTGATGATAGTTTATGAATTTATGCCTAATGGAAACCTTGGAGATGCCTTGCATGGTAAGCAAGCAGTTAGACAGCTTGTGGATTGGGTTTCAAGATATAAAATAGCTTTAGGAGTTGCTCAAGGACTTGCTTATCTTCACCATGACTGTTATCCACCGGTTATTCATCGCGACATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGGTTGGCCAAGATGATGGTCCGAAAGAATGAAACGGTCTCCATGGTTGCTGGTTCTTATGGCTACATTGCTCCTGAATATGGATATGCATTGAAGGTGGATGAAAAGATTGATGTATACAGTTATGGAGTAGTTTTACTAGAGCTTCTAACAGGAAAGAGGCCATTAGATTCAGAATTTGGAGAAAGTGTAGACATTGTAGAATGGATTAGAAGGAAGATTAGAGATAACAAATCTCTAGAAGAAGCATTAGATCCAAGTGTAGGAAACTGCAGACATGTTATAGAAGAGATGCTTTTAGTTTTAAGAATAGCAGTTATTTGCACTGCTAAGCTTCCTAAAGAAAGACCAAGTATGAGAGATGTGATAATGATGCTTGGAGAGGCAAAACCAAGAAGAAAAATCAGTGGCAACAATGAAACATCTTTAGCAGCTAACAACAATAACAAGGAGATGTCAGTTTTTAGCACATCACCAGTTAGTGGCCTTCTTTAG 3072 0.3747 MKKKKMQMKTKFFIFFCYIVIFCFSYSFSAASNDEVSALLSIKSGLIDPLNSLHDWKLDADHCNWIGVECNSAGTVENLDLSHKNLSGIVSNDIQKLQNLTSLNLCCNAFSSPFPKSIVNLTTLNILDVSQNFFIGEFPFGFGKALKLASLNVSSNEFTGLIPVDIGNVTSLEMLDLRGSFFEGSIPKSFGNLHKLKFLGLSGNNLTGKIPGELGKLSSLEYMIVGYNEFEGEIPSEFGNLTSLKYLDLAVSNLGGEIPNELGNLKLLDTLFLYNNNFEGRIPSQIGNITSLKFLDFSDNNLSGKIPDEMSLLKSLKLLNFMGNKLSGFVPSGIGNLPQLEVLELWNNSLSGPLPSNLGENSPLQWLDVSSNSLSGEIPETLCRKGNLTKLILFNNAFSGPIPSSLSTCSSLVRVRIHNNLLSGKVPVGLGKLEKLQRLELANNSLTGEIPDDIPSSASLSFIDLSRNKLHSSLPSTILSISNLQVFMVSHNNLEGKIPDQFQDSPSLTVLDLSSNHLSGTIPESIGSCQKLVNLNLQNNLLIGEIPKTLANMPTLAMLDLSNNSLTGHIPENFGSSPALEAFNVSYNKLEGSVPENGMLRTINPNNLVGNDGLCGGILPSCDQNSAYSSRHGSSHEKHIITGWIIGISSILAIGITILVARSLYVRWYTGGFCFRERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGGTGVVYKAEVPHSNTVVAVKKLWRSGNDVEVGGGGSDELVGEVNLLGRLRHRNIVRLLGFLHNDTDLMIVYEFMPNGNLGDALHGKQAVRQLVDWVSRYKIALGVAQGLAYLHHDCYPPVIHRDIKSNNILLDANLEARIADFGLAKMMVRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDSEFGESVDIVEWIRRKIRDNKSLEEALDPSVGNCRHVIEEMLLVLRIAVICTAKLPKERPSMRDVIMMLGEAKPRRKISGNNETSLAANNNNKEMSVFSTSPVSGLL 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03942 1023 Pfam Protein kinase domain 709 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03942 1023 FunFam Leucine-rich repeat receptor protein kinase EMS1 282 365 - -
Trre14g03942 1023 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 32 180 - -
Trre14g03942 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Trre14g03942 1023 SUPERFAMILY L domain-like 57 326 - -
Trre14g03942 1023 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 181 281 - -
Trre14g03942 1023 Gene3D Phosphorylase Kinase; domain 1 699 789 - -
Trre14g03942 1023 Gene3D Transferase(Phosphotransferase) domain 1 790 1012 - -
Trre14g03942 1023 MobiDBLite consensus disorder prediction 995 1023 - -
Trre14g03942 1023 Gene3D Ribonuclease Inhibitor 180 282 IPR032675 -
Trre14g03942 1023 SUPERFAMILY RNI-like 258 604 - -
Trre14g03942 1023 Gene3D Ribonuclease Inhibitor 283 383 IPR032675 -
Trre14g03942 1023 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515
Trre14g03942 1023 Pfam Leucine rich repeat 460 518 IPR001611 GO:0005515
Trre14g03942 1023 Pfam Leucine rich repeat 172 229 IPR001611 GO:0005515
Trre14g03942 1023 Gene3D Ribonuclease Inhibitor 31 179 IPR032675 -
Trre14g03942 1023 FunFam MDIS1-interacting receptor like kinase 1 707 793 - -
Trre14g03942 1023 PANTHER UNNAMED PRODUCT 172 918 - -
Trre14g03942 1023 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Trre14g03942 1023 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 366 626 - -
Trre14g03942 1023 Gene3D Ribonuclease Inhibitor 385 626 IPR032675 -
Trre14g03942 1023 SMART LRR_typ_2 193 217 IPR003591 -
Trre14g03942 1023 SMART LRR_typ_2 506 529 IPR003591 -
Trre14g03942 1023 SMART LRR_typ_2 481 504 IPR003591 -
Trre14g03942 1023 SMART LRR_typ_2 433 457 IPR003591 -
Trre14g03942 1023 SMART LRR_typ_2 337 361 IPR003591 -
Trre14g03942 1023 SMART LRR_typ_2 553 577 IPR003591 -
Trre14g03942 1023 SMART LRR_typ_2 289 313 IPR003591 -
Trre14g03942 1023 SMART LRR_typ_2 241 265 IPR003591 -
Trre14g03942 1023 SMART serkin_6 707 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03942 1023 SUPERFAMILY Protein kinase-like (PK-like) 703 985 IPR011009 -
Trre14g03942 1023 ProSitePatterns Protein kinases ATP-binding region signature. 713 737 IPR017441 GO:0005524
Trre14g03942 1023 FunFam MDIS1-interacting receptor like kinase 1 794 1004 - -
Trre14g03942 1023 ProSiteProfiles Leucine-rich repeat profile. 291 313 IPR001611 GO:0005515
Trre14g03942 1023 ProSiteProfiles Protein kinase domain profile. 707 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03942 1023 PRINTS Leucine-rich repeat signature 508 521 - -
Trre14g03942 1023 PRINTS Leucine-rich repeat signature 553 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03942 Trre-Chr14 47928939 47932329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03942 11 1023 Receptor kinase-like Gene Family AT1G08590 57.971 0.0 1154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g03942 Pkinase 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03942 - - gmx:100811284 1635.93