Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03938 ATGAATCACTTACTTCTTCTTGTTACCATATTTGTCCTTGTCCCTGTTCTGTTTTATTTGATTAAAACACTTCACTCAATTTTCTATGTTCCATACAAAATCCAACGACACTTCCGCAACCAAGGTATATCCGGTCCTACCTACCGTCCGATCTATGGAAACTCATCTCAAATCAAACGCCTCTACGCGCAAACTAAATCAGAGCCAAATTCATTCAACCACGACATCTTAAAACGTGTGGTTCCATTCTACCAAAGGTGGTCTTGCATGTATGGGAAAACTTTCCTTTACTGGTTCGGGTCAATACCCCGGTTGGCTATATCCGACCCGGATATGATCAAGGAAGTGTTGGTTACTAAATGTGGAGAGTATGGGAAGGTTCCTTACAATCCACAATCGAAGTTGCTTTTTGGACAAGGACTTGTTGGGTTGAATGGTGATCAATGGAATTTTCATAGAAGGATAATCAACTTGGCATTCCACACCGAAATTCTTAAGGGATGGGTGCCGGATATTGTGGAAAGTGTGACAAAGATGCTGGAAAAATGGGAAATTGAAAGACGAGGAAAAGATGAATTTGAAATAGATGTGCACAGAGAGCTTCATGAACTTTCTGCAGAAATTATATCAAGGACAGCTTTTGGCAGCAGCTATGAAGAAGGCAAGCATATTTTCAAATTACAGGAGCAGCAAATGCATCTTTTCTCACAGGCAGTTAGAAGTATATATATTCCAGGATTTAGATATTTGCCAACTAAGAAGAACAGGGATAGATGGAGACTAGATAAAGAGACGCGTGAATCAATTTGTAAGCTGATTAAGACCAAGAGTAATGTCAGAGAAAATACCAAAAATGTACTAAATTCATTAATGGGTTCCTACAAGAATGAAGTTGGAGGAGAAGACAAATTAGGGCTGGAAGAAATTATAGATGAGTGTAAAACTATCTACTTTGCTGGAAAGGATACAACAGCTAACTTGTTGACATGGGCACTTCTTGTTTTGGCCAAACATCAAGAATGGCAAAGTAAAGCGCACGAAGAAGTTCTTCGTGTCATTGGACACAATCGACTTCCAGTTGCAGACAATTTAAATGACTTTAAGATTGTCAGCATGATAATTAATGAAACACTTCGGCTTTATCCTCCAGCTTCGATGCTAACAAGGCAAACTGCTAAAAATGTGATGATAGGGAGCATTGAAGTTCCTGCAAAGACACAACTCTACTTGGCATTGACCGCTGTTCATCATGACAAAGAAATCTGGGGACAAGATTGTCACGAGTTTAATCCAATGAGATTTTGCGAGCCTCGGAAGCATTTAGCAGCATTCTTTCCTTTTGGATTGGGGCCTAGAACTTGTGTTGGGCAAAATTTGGCATTGGTTGAGGCAAAAATAGCTCTTGCGTTGATTATTCAACGTTATAGTTTTGTGGTATCTCCAAGCTATATACATGCACCTATACTATTTATAACTTTGCAGCCTCAACATGGTGCACAAATCTTCTTCAAAAGGATTTCATATTGA 1527 0.3923 MNHLLLLVTIFVLVPVLFYLIKTLHSIFYVPYKIQRHFRNQGISGPTYRPIYGNSSQIKRLYAQTKSEPNSFNHDILKRVVPFYQRWSCMYGKTFLYWFGSIPRLAISDPDMIKEVLVTKCGEYGKVPYNPQSKLLFGQGLVGLNGDQWNFHRRIINLAFHTEILKGWVPDIVESVTKMLEKWEIERRGKDEFEIDVHRELHELSAEIISRTAFGSSYEEGKHIFKLQEQQMHLFSQAVRSIYIPGFRYLPTKKNRDRWRLDKETRESICKLIKTKSNVRENTKNVLNSLMGSYKNEVGGEDKLGLEEIIDECKTIYFAGKDTTANLLTWALLVLAKHQEWQSKAHEEVLRVIGHNRLPVADNLNDFKIVSMIINETLRLYPPASMLTRQTAKNVMIGSIEVPAKTQLYLALTAVHHDKEIWGQDCHEFNPMRFCEPRKHLAAFFPFGLGPRTCVGQNLALVEAKIALALIIQRYSFVVSPSYIHAPILFITLQPQHGAQIFFKRISY 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03938 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Trre14g03938 508 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 SUPERFAMILY Cytochrome P450 45 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 Pfam Cytochrome P450 83 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 Gene3D Cytochrome P450 27 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g03938 508 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03938 Trre-Chr14 47900917 47904090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03938 25 507 Cytochrome P450 AT1G75130 55.144 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03938 - - mtr:11418505 917.146