Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03925 ATGGCACCCAATCCGAAAGTTGTAGCGGCCTTCCGCGCAATGAAGAGCATTGGGATTGAGGAACATAAAGTGAAACCTGTATTGAAGAGACTACTTAGATTGTATGATAAAAACTGGGAACTTATTGAAGAAGAGAATTATAGGGTTCTTGCTGATGCAATTTTTGATGCGGATGAAAACCAGGAGTTGGAGCCGGAGCCGGATCCGGAAAAGAAAAATAAGAAGAAGGTGGATGTAGACGATGAAGCTCCTACGCACGAAGAGCCAGTGCGACCTTTGAAGAGGTTGCGTTTAAGAGGTCAAGACGGTCAACCATCACGCCTGCTGTCTAACGGTGGTCCAAGTTCAGCCACCTTTCCATTGAAATCACCTAAACTGGAACCTGGCACAGTACCTGGAAGTAGTTCCAGACTGCAGCCTCAAAGCACATCAGTGTTATCCAATGGAAATGCCGTTGTTGACAAGGGAAAGAAGCCTCTATCACCTGAAGATACTCTAAGAGGGAGAAGATCTATATCTGACAGAAATCCACCCCCAGCGGTGTTTAAAGAACCAGCTGTTGAACCAGGAACCTCTCCGTTGTCAAAAAGCAAAACGCCTCGTTCTTACCCTTTTATCATCCCCAAGCCCGAGCCTATTGATGAAGAACCAGATTATTTGGCTCCCATTTCAATGATTCTTCCTGAACCAAGTGTTAGAGAATCTTCGTCGAAGAATGATACCGCTGGAGAGCAAGATGGCAACAACACTGTGGCATCACAATGCAGAAACGAAAATGTTGAAGGTGAAGATATTCTTCCTTCCTCAAATGAAGAAGCGAATTCTAATGCTGAGCTAGCCTCATCATCTACGGGAGAGGATGCATCTGTAAAGGTAATACCAACTGTTGGTCTTTCAAAAGAACCCGAGGCAAATGGCACACTGATTGGCGGAAGAAATAAAGATTCCGCAATACCTTCTTGCGCTGCAAATGGATCAACCTCTGTTAAGTCTTCTCCTGCCTTGGTTGCACCCGAAGTTCCCGTTTCTCCACCCTGCCCAAGTGGTCCGGATGATGCTGTACTAGTTTCCAAGAATGATTTCTCGGAAAGTGGTGATGGGGAGGAGCCAAGGGAACCTATGCCTCAAAATTCATGTAATGTAATGAATGCTCCAAAGCATCATCATACAACTGATGATACAAGGGCTGTTTGTGCTACCAATGACCTAACAAAGGGAGAAGAAAAAGTGAAAATTTCATGGGTGAATAATTCCAACAGTGATATTCCACCTCCGTTTCACTACATACCCCGAAACTTGGTGTTCCGAGATGCATATGTTAATATTTCTTTATCTCGTATTGGGAGTGAAGATTGTTGTTCTACCTGTTTGGGCAATTGTGTCTTATCACCTAAACCATGTTTGTGTGCAAATAAAACTGGAGGGGATTTTGCCTACACTGCACAAGGTGTACTAAAGGAAAAGTTCCTTGAAGAGTGTATTGCCATCAGCCGTGATCCTCAAAATTATTCCTATTGCAAAGAATGCCCACTGGAAATGTCAAAGAATGATGGCTGTTTAGAACCATGCAAAGGACACTTGAAGAGGAAATTTATTAAAGAGTGCTGGAGCAAATGTGGCTGCGGGAAACATTGTGGCAATCGGATTGTCCAGCGTGGAATATCTCGCAACTTGCAGGTGTTTTTAACTTCAGACGGAAAAGGATGGGGTCTTCGTACCTTAGAGGATCTTCCAAAAGGTGCATTTGTATGCGAGTTTGTTGGAGAAATTTTGACTGTCGAAGAATTGCATGAGAGGAACTTGAAATATCCCAAAAGTGGGAAATATACGTACCCAATTTTATTGGATGCAGAATGGAACTCAGGAGTTGTAAAGGATAACCAAGCTCTTTGCTTATATGCAGCATCATATGGAAATGCTGCAAGGTTTATTAATCACAGATGTTTAGATGCAAACTTGATTGAGATCCCGGTTGAAGTTGAGGGTCCATCTCATCACTATTATCATTTCGCCTTCTTCACCTCCAGAGAAATCGCAGCACATGAAGAGTTGACCTGGGACTATGGCATCGACTTTGATGACGATGATCAGCCTGTCGAACTGTTCCGGTGCAAATGTGGCAGTAAATTCTGCAGGAATATGAAGCGATCGAATACCTCCCTGATGGCTTATGGTTCATGCTTATGTGATATACTGCATCCACTTCCAGATTGA 2214 0.435 MAPNPKVVAAFRAMKSIGIEEHKVKPVLKRLLRLYDKNWELIEEENYRVLADAIFDADENQELEPEPDPEKKNKKKVDVDDEAPTHEEPVRPLKRLRLRGQDGQPSRLLSNGGPSSATFPLKSPKLEPGTVPGSSSRLQPQSTSVLSNGNAVVDKGKKPLSPEDTLRGRRSISDRNPPPAVFKEPAVEPGTSPLSKSKTPRSYPFIIPKPEPIDEEPDYLAPISMILPEPSVRESSSKNDTAGEQDGNNTVASQCRNENVEGEDILPSSNEEANSNAELASSSTGEDASVKVIPTVGLSKEPEANGTLIGGRNKDSAIPSCAANGSTSVKSSPALVAPEVPVSPPCPSGPDDAVLVSKNDFSESGDGEEPREPMPQNSCNVMNAPKHHHTTDDTRAVCATNDLTKGEEKVKISWVNNSNSDIPPPFHYIPRNLVFRDAYVNISLSRIGSEDCCSTCLGNCVLSPKPCLCANKTGGDFAYTAQGVLKEKFLEECIAISRDPQNYSYCKECPLEMSKNDGCLEPCKGHLKRKFIKECWSKCGCGKHCGNRIVQRGISRNLQVFLTSDGKGWGLRTLEDLPKGAFVCEFVGEILTVEELHERNLKYPKSGKYTYPILLDAEWNSGVVKDNQALCLYAASYGNAARFINHRCLDANLIEIPVEVEGPSHHYYHFAFFTSREIAAHEELTWDYGIDFDDDDQPVELFRCKCGSKFCRNMKRSNTSLMAYGSCLCDILHPLPD 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03925 737 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 719 - -
Trre14g03925 737 MobiDBLite consensus disorder prediction 319 333 - -
Trre14g03925 737 SUPERFAMILY SET domain 410 712 IPR046341 -
Trre14g03925 737 SMART set_7 556 695 IPR001214 GO:0005515
Trre14g03925 737 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 734 IPR025776 -
Trre14g03925 737 Gene3D - 1 60 IPR043017 -
Trre14g03925 737 MobiDBLite consensus disorder prediction 65 101 - -
Trre14g03925 737 Pfam Pre-SET motif 404 548 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Trre14g03925 737 MobiDBLite consensus disorder prediction 157 171 - -
Trre14g03925 737 CDD SET_SETDB-like 424 689 - -
Trre14g03925 737 MobiDBLite consensus disorder prediction 230 257 - -
Trre14g03925 737 Pfam SET domain 568 689 IPR001214 GO:0005515
Trre14g03925 737 MobiDBLite consensus disorder prediction 59 391 - -
Trre14g03925 737 MobiDBLite consensus disorder prediction 129 150 - -
Trre14g03925 737 ProSiteProfiles SET domain profile. 556 689 IPR001214 GO:0005515
Trre14g03925 737 Gene3D SET domain 403 714 IPR046341 -
Trre14g03925 737 MobiDBLite consensus disorder prediction 268 289 - -
Trre14g03925 737 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Trre14g03925 737 SMART preset_2 400 540 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Trre14g03925 737 MobiDBLite consensus disorder prediction 104 118 - -
Trre14g03925 737 ProSiteProfiles Pre-SET domain profile. 452 553 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03925 Trre-Chr14 47803528 47807911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03925 394 712 Su(var)3-9 homologs AT1G73100 29.762 1.34e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre14g03925 Pre-SET 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03925 - - gmx:100809678 956.822