Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03913 ATGGAAGCTCGTCATGCTTTTTCAATTGAAAGATCAAGTTCCAATCAGCTGAATAACATAGGGATGTCTGGAGCACTTCCTTCATCGTTGTCTGTCCATCCAACACCTCTAGAAGAGACATACCCCAGATTTTCTGATTCACAGCCAGCTTTTGTAGAAAAAGATCCTCAGACAAGAACTTTTAATCATTCGAATCATATAAGTTCCAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATATTCAACAGACCTTCATCACTCATCCCTTTCACCTCATGAAAAACACTCTAGAAATGCTCATTTTATTTCACAGTCAATGAGCAACGTGGCTTCGGTCCCATTACCGTATTCTTCAAATAATGGTCCACTACCTTCTACAACATCAACACATTATTCCAATGGAAGCAGTGCTTCATGGCATGCAGATTCCTTGCCTAGCTTTCTTGAATTCTCTGTTAATGCCTCAATTGATAATAACCAAGTAGAGAGCAGTGCCTGCAATATTATGGCTACTGAGGAGTTTCCTAAGCGAAATGATTGGCAAGAGTGGGCTGACCAGCTAATCAGTGATGATGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGGCGGTGGATCCCATTTCAAAGTCATCTTCACAATTTTCGGCAGGACACCAATCACAAGGCCACCAACAACTTCCAGCTCTATCTGGAGAAAACCATGGTTGTGTCGCTCCATCTTCCTCAGCAAATTCTGCACCTGCCAAGCCACGGATGCGTTGGACTCCCGAGCTTCACGAGGCATTTGTGGAGGCTGTCACCCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATTTATCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCAGAGTCTTCTGAAGGAGCTGCGGATAAAAAACTAAGCCCCATTGAAGATATTTCATCTCTAGATTTGAAAACTGGCATTGAGATCACGGAAGCTCTGCGACTGCAGATGGAGGTCCAGAAACGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAGCAAGGCAGGTACCTCCAGATGATGTTTGAGAAGCAATGTAAATCTGGTGTTGAACCATTTAAAGCATCGTCATCAGCCATTGAGAATCCATCTGGCGTGTCTTCTGACACCATGAAAAATTCTCTTACTAAAAATGAATCGGAAGCATCCAAAAAGGACCTTTGCAGGTCAGGACCTGATGAAGCTAATGGTAGTACCACAGTTGAGGAAAGCTCACTGCAGGATACCTCCAAAGCCCAAGTTTCTGATGATCTTAAGCAAAATGACAACGAAGATAGCGCTCAACCCCCTAAGCGTCCAAGAACAGAAGAGTAA 1452 0.4298 MEARHAFSIERSSSNQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPAFVEKDPQTRTFNHSNHISSSGAVGHMFSSSPGYSTDLHHSSLSPHEKHSRNAHFISQSMSNVASVPLPYSSNNGPLPSTTSTHYSNGSSASWHADSLPSFLEFSVNASIDNNQVESSACNIMATEEFPKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKAVDPISKSSSQFSAGHQSQGHQQLPALSGENHGCVAPSSSANSAPAKPRMRWTPELHEAFVEAVTQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAADKKLSPIEDISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDTMKNSLTKNESEASKKDLCRSGPDEANGSTTVEESSLQDTSKAQVSDDLKQNDNEDSAQPPKRPRTEE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03913 483 MobiDBLite consensus disorder prediction 439 460 - -
Trre14g03913 483 MobiDBLite consensus disorder prediction 55 89 - -
Trre14g03913 483 SUPERFAMILY Homeodomain-like 260 316 IPR009057 -
Trre14g03913 483 Coils Coil 350 370 - -
Trre14g03913 483 MobiDBLite consensus disorder prediction 400 483 - -
Trre14g03913 483 MobiDBLite consensus disorder prediction 30 49 - -
Trre14g03913 483 MobiDBLite consensus disorder prediction 461 483 - -
Trre14g03913 483 Pfam Myb-like DNA-binding domain 264 315 IPR001005 -
Trre14g03913 483 MobiDBLite consensus disorder prediction 400 423 - -
Trre14g03913 483 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 232 466 IPR044848 GO:0003700
Trre14g03913 483 Pfam MYB-CC type transfactor, LHEQLE motif 347 394 IPR025756 -
Trre14g03913 483 NCBIfam myb-like DNA-binding domain, SHAQKYF class 262 316 IPR006447 GO:0003677
Trre14g03913 483 Gene3D - 261 320 - -
Trre14g03913 483 MobiDBLite consensus disorder prediction 55 100 - -
Trre14g03913 483 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 259 319 IPR017930 -
Trre14g03913 483 FunFam Myb family transcription factor 261 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03913 Trre-Chr14 47741204 47748463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03913 1 404 G2-like Transcription Factor Family AT4G28610 49.756 7.89e-107 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre14g03913 Myb_DNA-binding 4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03913 - - gmx:100810560 730.709