Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03854 ATGGCAAAGGAACAAATGCAAGTGCTAAATGCACTTGATGTGGCAAAAACACAATGGTACCATTTCACTGCAATCATCATAGCTGGTATGGGATTTTTCACTGATGCATATGATCTGTTCTGTATATCGCTTGTTACAAAGTTGCTCGGCCGCATATACTACCATGTTGATGGTGCTGCGAAGCCTGGTTCATTGCCTCCCAATGTATCGGCTGCTGTCAACGGGGTTGCTTTTGTTGGAACACTTACAGGACAACTTTTCTTTGGCTGGCTTGGCGATAAGTTGGGAAGGAAAAAAGTGTATGGCATGACACTCATGATGATGGTAATCTGCTCGATCGGCTCTGGTCTTTCTTTTGGACACCATCCAAAAGCTGTCATGATAACTTTATGTTTCTTCCGCTTTTGGCTTGGGTTTGGTATTGGTGGTGACTACCCGCTTTCGGCTACTATAATGTCGGAGTATTCTAATAAGAAGACTCGTGGTGCCTTTATTGCAGCCGTATTTGCCATGCAAGGTTTTGGAATTTTGGCAGGTGGTATATTTGCAATCATAATTTCAGCCACATTCAACGCTTTGTATGATGCACCATCTTATGAGTTTGATCCAGTTCGGTCAACTGTTCCACAAGCAGACTACATTTGGAGGATAATTGTGATGGTTGGAGCATTACCAGCTGCAATGACTTACTACTCGCGGACGAAGATGCCAGAAACTGCTCGGTACACCGCTCTAGTTGCTAAGAACACGGCGAAGGCTGCAGCAGATATGTCTAAGGTTCTGCAGGTTGAGATTGAAGCTGAACCAGAACAAGAGAAGGCAAAATCATATGGCTTGCTCTCGAAGGAGTTTCTCCATCGCCATGGATTACATCTACTTGGTACCGCAAGCACTTGGTTCTTGCTCGACATAGCATTTTATAGCCAAAATCTATTCCAGAAGGATATCTTCAGTGCAGTTGGTTGGATACCACCTGCAAAAACCATGAATGCAATTGAGGAGGTTTACAAAATTGCGAGAGCTCAAACGCTTATTGCTCTATGCAGTACAGTTCCAGGCTACTGGTTTACGGTGGCTTTCATTGACAGAATCGGGAGATTTAAAATTCAGTTGATGGGATTTTTCTTTATGACCGTCTTCATGTTTGCTCTTGCCATTCCTTATGATTACTGGACACTTAAGGATCACCGAATAGGATTCGTGGCATTGTATTCGTTGACCTTCTTCTTTGCAAACTTTGGTCCCAATGCTACAACGTTTGTTGTACCAGCGGAGATTTTTCCTGCTAGATTCCGGTCTACCTGCCATGGAATATCATCCGCATCGGGGAAACTTGGGGCAATGGTTGGTGCATTTGGGTTCTTATACTTAGCACAGAACAAAGACAAGACCAAAACAGATGCAGGGTACCCTCCAGGTATTGGTGTGAAGAACTCGCTTCTTCTCTTAGGTGTGGTTAACATTTTGGGATTCCTTTTTACTTTCTTGGTGCCTGAGGCAAAGGGAAAATCTTTGGAGGAGATGTCAGGTGAGAATGAAGAGGAAGCCGAAACCAGCGCAGAGTTGCAGCAATCCCGTTCTCATAACAGAACTGTTCCACTTGTTTAG 1608 0.4403 MAKEQMQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGSLPPNVSAAVNGVAFVGTLTGQLFFGWLGDKLGRKKVYGMTLMMMVICSIGSGLSFGHHPKAVMITLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISATFNALYDAPSYEFDPVRSTVPQADYIWRIIVMVGALPAAMTYYSRTKMPETARYTALVAKNTAKAAADMSKVLQVEIEAEPEQEKAKSYGLLSKEFLHRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAVGWIPPAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVAFIDRIGRFKIQLMGFFFMTVFMFALAIPYDYWTLKDHRIGFVALYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNKDKTKTDAGYPPGIGVKNSLLLLGVVNILGFLFTFLVPEAKGKSLEEMSGENEEEAETSAELQQSRSHNRTVPLV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03854 535 NCBIfam phosphate:H+ symporter 11 511 IPR004738 GO:0005315|GO:0006817|GO:0016020
Trre14g03854 535 Coils Coil 505 525 - -
Trre14g03854 535 Pfam Sugar (and other) transporter 26 509 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre14g03854 535 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 502 IPR020846 GO:0022857
Trre14g03854 535 SUPERFAMILY MFS general substrate transporter 12 509 IPR036259 -
Trre14g03854 535 CDD MFS_PhT 25 501 - -
Trre14g03854 535 Gene3D MFS general substrate transporter like domains 20 526 IPR036259 -
Trre14g03854 535 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 500 - -
Trre14g03854 535 MobiDBLite consensus disorder prediction 506 535 - -
Trre14g03854 535 FunFam Inorganic phosphate transporter 1-6 20 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03854 Trre-Chr14 47297032 47298639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03854 1 517 Inorganic Solute Cotransporters AT3G54700 84.778 0.0 923
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03854 K08176 - gmx:100819445 908.286