Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03820 ATGTGTTATTCATCTCGTGAGGATCATGTTCAAGTTGTAGAGGGAAGTGGTGTTGATGAGATATATGATGCATTGGTTAGACGAATTCTGCCTCCAGCGTCGGTATCGTTAAATCCTAATTATAAGTTTTTTGTTGGCCTCGCTGGTCCTCCTGGTGCTGGAAAAAGCACCATAGCACATGAAGTAGCCAGTCGCATAAACAAGCTTTGGCCGGAGAAAGCTTCTTCCTTTAACTCTCAGGTTCGACCTCCTGATGTTGCTATTGTGGTTCCCATGGATGGTTTTCATCTTTATCGCTCTGAACTAGATGCAATGAAGAATCCCGAGGAAGCGCATGCCAGAAGGGGAGCTCCTTGGACATTCAATCCCACGCGACTGCTAACGTGTCTCAAGAATCTGAGAGTTCATGGATCGGTTTATGCACCATCTTTTGACCATGGTGTTGGGGATCCAGTTGAAGATGATATATTTGTGAACCTTCAGCACAAAATCATTATTGTAGAAGGTAACTATTTGCTCCTGGAAGATGGGGTCTGGAAGGAGATTTCATCTTTGTTTGATGAGAAATGGTTTATTGATATTGATATTGACAAAGCAATGCAGCGAGTTTTAAAGAGGCATATCTCAACTGACAAGCCTGCAGACATCGCTAAGCAGCGGGTAGAGAACAACGACAGACTCAATGCAGAACTTATACTGAAGTCCAAGAAAAATGCTGATATAATAATCAAGTCAGTTGATTTCTGA 747 0.4257 MCYSSREDHVQVVEGSGVDEIYDALVRRILPPASVSLNPNYKFFVGLAGPPGAGKSTIAHEVASRINKLWPEKASSFNSQVRPPDVAIVVPMDGFHLYRSELDAMKNPEEAHARRGAPWTFNPTRLLTCLKNLRVHGSVYAPSFDHGVGDPVEDDIFVNLQHKIIIVEGNYLLLEDGVWKEISSLFDEKWFIDIDIDKAMQRVLKRHISTDKPADIAKQRVENNDRLNAELILKSKKNADIIIKSVDF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03820 248 PANTHER URIDINE KINASE 18 242 - -
Trre14g03820 248 Gene3D - 137 248 IPR027417 -
Trre14g03820 248 Gene3D - 71 136 IPR027417 -
Trre14g03820 248 Pfam Phosphoribulokinase / Uridine kinase family 45 246 IPR006083 GO:0005524|GO:0016301
Trre14g03820 248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 246 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03820 Trre-Chr14 46922289 46927326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03820 43 243 PRT Gene Family AT1G55810 25.481 8.05e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03820 - - gmx:100798850 436.417