Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03819 ATGTCTGTAATAAGGGATCATGTTCAAGTTGTAGAGGGAAGTGGTGTTGATGAGATATATGATGCATTGGTTAGACGAATTCTGCCTCCAGCGTCGGTATCGTTAAATCCTAATTATAAGTTTTTTGTTGGCCTCGCTGGTCCTCCTGGTGCTGGAAAAAGCACCATAGCACATGAAGTAGCCAGTCGCATAAACAAGCTTTGGCCGGAGAAAGCTTCTTCCTTTAACTCTCAGGTTCGACCTCCTGATGTTGCTATTGTGGTTCCCATGGATGGTTTTCATCTTTATCGCTCTGAACTAGATGCAATGAAGAATCCCGAGGAAGCGCATGCCAGAAGGGGAGCTCCTTGGACATTCAATCCCACGCGACTGCTAACGTGTCTCAAGAATCTGAGAGTTCATGGATCGGTTTATGCACCATCTTTTGACCATGGTGTTGGGGATCCAGTTGAAGATGATATATTTGTGAACCTTCAGCACAAAATCATTATTGTAGAAGGTAACTATTTGCTCCTGGAAGATGGGGTCTGGAAGGAGATTTCATCTTTGTTTGATGAGAAATGGTTTATTGATATTGATATTGACAAAGCAATGCAGCGAGTTTTAAAGAGGCATATCTCAACTGACAAGCCTGCAGACATCGCTAAGCAGCGGGTAGAGAACAACGACAGACTCAATGCAGAACTTATACTGAAGTCCAAGAAAAATGCTGATATAATAATCAAGTCAGTTGATTTCTGA 741 0.4251 MSVIRDHVQVVEGSGVDEIYDALVRRILPPASVSLNPNYKFFVGLAGPPGAGKSTIAHEVASRINKLWPEKASSFNSQVRPPDVAIVVPMDGFHLYRSELDAMKNPEEAHARRGAPWTFNPTRLLTCLKNLRVHGSVYAPSFDHGVGDPVEDDIFVNLQHKIIIVEGNYLLLEDGVWKEISSLFDEKWFIDIDIDKAMQRVLKRHISTDKPADIAKQRVENNDRLNAELILKSKKNADIIIKSVDF 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03819 246 Pfam Phosphoribulokinase / Uridine kinase family 43 244 IPR006083 GO:0005524|GO:0016301
Trre14g03819 246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 244 IPR027417 -
Trre14g03819 246 PANTHER URIDINE KINASE 16 240 - -
Trre14g03819 246 Gene3D - 135 246 IPR027417 -
Trre14g03819 246 Gene3D - 69 134 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03819 Trre-Chr14 46922289 46927813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03819 41 241 PRT Gene Family AT1G55810 25.481 9.12e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03819 - - gmx:100798850 436.032