Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03797 ATGGGATGCATGTCAGGTTTCCTACAAATCTTCGATCGCCATCAATTATTCCCCGGAAAACGCATCTACACCGTTAAAACACTCCCTTCCACTAAATCAACGGAACCGGAAACAAACGGTAATTCACCGGCTGAATCAGAATCAACACCAGAAACACAAACACCACAACAAGAAAAACCTTCTCTACCGGTTCACCCAGTTTTCGATTTCAAAGAAGGAACAAGATCTCCATGGAAATTCACCAGAGAAGCACCAAGACTATCATTAGATAGCAGAGCAGTTATAGATGCAAAAGGAACAATTCAAATTCACCCAAAACATGAAGAAATACGACGTCGTTCAACTTCAACTAGCGTCGTTGCAAAACTCATGGGTCTCGAAGAAGACTCTGATCCTAACCCTAAACTCCAAAAATCTGCTTCAGAATCAAGAGCTCACAGAGATCTATCACAACAACAACAACAACAGTATCGTTTCTTTGACACTACGAATTTTCAGTTAAAGAAATTCGAGAATATTTCGTCGTTAAATGACAACAGTGTTTCAGATCTAAACGAGAAAACAGAACCAGTCAGAGGAATTACAACGAGACAAAAGAAGATTTTCTATGATTCTGCAGACTTTTTTCCTGGTCCGAAACAGAGTGTTTCTGTTTCTGTTCAAGGTGAGATTGAAAAAAGGTTGAAGATGCGTGGGATTCATGAACCTTCTAAAGATCTTGATACATTGAAACAAATCCTTGAAGCTTTGCAGCTTAAAGGTCTATTACATTCGAAGAAATTAACAAATCATAGAAACTTTGTTATGGAAAATGCAAATGATCCTCATTCTCCGATTGTGGTTATGAAACCAGGAAGATCAATGAATCGAACCGGTTGGACCGGTTACGATTCTCCATCACCAGCTTCCACTTTCCGGTCCAAGGTTAAAACTCGTCCGGATCATATTCAATCACAGATCAAAAACAGAAACAACTTAAATTCCCCCACGCGCAGTCCCAATCGCGTGAGAAAGGTTACCATTACAAACAATGTTGATCTCAGAAGAGTTACTCCGGTTCATTTATCGAGAAATGAACCGGACCGGAAATCACCGAACCGGTCACCAAGGATGAGAAAGAAGACTGTGGCGGAAGATGAATCATCCACCGTTTCTGATAGCTCTTCACATACCGATACAGAGAGGTTGATTACGGAGCAATACAAAGAAGGGAAAGAGTTACTACAGAGGTGTGATAAGTTACTGAACAGTATAGCGGAAATAACTGAGTTACAACAACCGAGTCCGGTATCGGTACTTGACTCGTCGTTTTATAAAGATGACTCGTCGTGTTCACCTTCACCGGTAATGAAACGATGCATTGAATATAAAGGTAAGTGA 1380 0.4051 MGCMSGFLQIFDRHQLFPGKRIYTVKTLPSTKSTEPETNGNSPAESESTPETQTPQQEKPSLPVHPVFDFKEGTRSPWKFTREAPRLSLDSRAVIDAKGTIQIHPKHEEIRRRSTSTSVVAKLMGLEEDSDPNPKLQKSASESRAHRDLSQQQQQQYRFFDTTNFQLKKFENISSLNDNSVSDLNEKTEPVRGITTRQKKIFYDSADFFPGPKQSVSVSVQGEIEKRLKMRGIHEPSKDLDTLKQILEALQLKGLLHSKKLTNHRNFVMENANDPHSPIVVMKPGRSMNRTGWTGYDSPSPASTFRSKVKTRPDHIQSQIKNRNNLNSPTRSPNRVRKVTITNNVDLRRVTPVHLSRNEPDRKSPNRSPRMRKKTVAEDESSTVSDSSSHTDTERLITEQYKEGKELLQRCDKLLNSIAEITELQQPSPVSVLDSSFYKDDSSCSPSPVMKRCIEYKGK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03797 459 MobiDBLite consensus disorder prediction 352 380 - -
Trre14g03797 459 MobiDBLite consensus disorder prediction 290 395 - -
Trre14g03797 459 MobiDBLite consensus disorder prediction 291 307 - -
Trre14g03797 459 MobiDBLite consensus disorder prediction 128 145 - -
Trre14g03797 459 MobiDBLite consensus disorder prediction 27 67 - -
Trre14g03797 459 MobiDBLite consensus disorder prediction 318 349 - -
Trre14g03797 459 PANTHER LONGIFOLIA PROTEIN 379 456 IPR033334 GO:0051513
Trre14g03797 459 MobiDBLite consensus disorder prediction 124 153 - -
Trre14g03797 459 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03797 Trre-Chr14 46659716 46661278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03797 77 456 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 36.829 2.11e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03797 - - lja:Lj1g3v4449210.1 427.943