Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03796 ATGGGAAAAAAGGATCGTAAGCTCGAGAAACAAATTCAAAAGCAAATGGGATGCATGTCAGGTTTCCTACAAATCTTCGATCGCCATCAATTATTCCCCGGAAAACGCATCTACACCGTTAAAACACTCCCTTCCACTAAATCAACGGAACCGGAAACAAACGGTAATTCACCGGCTGAATCAGAATCAACACCAGAAACACAAACACCACAACAAGAAAAACCTTCTCTACCGGTTCACCCAGTTTTCGATTTCAAAGAAGGAACAAGATCTCCATGGAAATTCACCAGAGAAGCACCAAGACTATCATTAGATAGCAGAGCAGTTATAGATGCAAAAGGAACAATTCAAATTCACCCAAAACATGAAGAAATACGACGTCGTTCAACTTCAACTAGCGTCGTTGCAAAACTCATGGGTCTCGAAGAAGACTCTGATCCTAACCCTAAACTCCAAAAATCTGCTTCAGAATCAAGAGCTCACAGAGATCTATCACAACAACAACAACAACAGTATCGTTTCTTTGACACTACGAATTTTCAGTTAAAGAAATTCGAGAATATTTCGTCGTTAAATGACAACAGTGTTTCAGATCTAAACGAGAAAACAGAACCAGTCAGAGGAATTACAACGAGACAAAAGAAGATTTTCTATGATTCTGCAGACTTTTTTCCTGGTCCGAAACAGAGTGTTTCTGTTTCTGTTCAAGGTGAGATTGAAAAAAGGTTGAAGATGCGTGGGATTCATGAACCTTCTAAAGATCTTGATACATTGAAACAAATCCTTGAAGCTTTGCAGCTTAAAGGTCTATTACATTCGAAGAAATTAACAAATCATAGAAACTTTGTTATGGAAAATGCAAATGATCCTCATTCTCCGATTGTGGTTATGAAACCAGGAAGATCAATGAATCGAACCGGTTGGACCGGTTACGATTCTCCATCACCAGCTTCCACTTTCCGGTCCAAGGTTAAAACTCGTCCGGATCATATTCAATCACAGATCAAAAACAGAAACAACTTAAATTCCCCCACGCGCAGTCCCAATCGCGTGAGAAAGGTTACCATTACAAACAATGTTGATCTCAGAAGAGTTACTCCGGTTCATTTATCGAGAAATGAACCGGACCGGAAATCACCGAACCGGTCACCAAGGATGAGAAAGAAGACTGTGGCGGAAGATGAATCATCCACCGTTTCTGATAGCTCTTCACATACCGATACAGAGAGGTTGATTACGGAGCAATACAAAGAAGGGAAAGAGTTACTACAGAGGTGTGATAAGTTACTGAACAGTATAGCGGAAATAACTGAGTTACAACAACCGAGTCCGGTATCGGTACTTGACTCGTCGTTTTATAAAGATGACTCGTCGTGTTCACCTTCACCGGTAATGAAACGATGCATTGAATATAAAGATCTAGGAGCAGAGTCAGAAGATGAAACATGGAGTGCAACATTGTATTGCAATGAAGCCAAGTCAGAGGATTGTGATTTCATATACATTTCAGAAGTACTACGTGCTTCTAATTACTTGCCGGAAGACAATGACATGTTCTTGTTACTAGAACAACAACAATACCTCAAGGGAAACGACACTTCCAAAGTTTCGACTCTTCAAAGACGGTTAATCTTTGACACAATACATGAGATCCTCAACCGTAAACGACGTTTGCCACCGTGGAAGTTGGAGAACGCGCCGTCGTTAAAATTTATATGGTCCGAAATTCGGAGAATCCAAGAAAGGGATGAGTCGGAGGACTTGTTTGAGGTTATATGTGGAGTGTTGAGAAAAGATATGAGTGTAGAGAATGAATGGGGTGAATGCAACGTGGAAATTGGAGATGTTGTGTTGGATATCGAACGGTTCATATTCAAAGATCTCATCGAAGAAACCATTAGAGATTTAGCGTTGTGTAATAAGGTACCGCGTAACAAAGTTTCGATGCTTCGTAGGAAGTTAGAGTTTTAA 1971 0.4033 MGKKDRKLEKQIQKQMGCMSGFLQIFDRHQLFPGKRIYTVKTLPSTKSTEPETNGNSPAESESTPETQTPQQEKPSLPVHPVFDFKEGTRSPWKFTREAPRLSLDSRAVIDAKGTIQIHPKHEEIRRRSTSTSVVAKLMGLEEDSDPNPKLQKSASESRAHRDLSQQQQQQYRFFDTTNFQLKKFENISSLNDNSVSDLNEKTEPVRGITTRQKKIFYDSADFFPGPKQSVSVSVQGEIEKRLKMRGIHEPSKDLDTLKQILEALQLKGLLHSKKLTNHRNFVMENANDPHSPIVVMKPGRSMNRTGWTGYDSPSPASTFRSKVKTRPDHIQSQIKNRNNLNSPTRSPNRVRKVTITNNVDLRRVTPVHLSRNEPDRKSPNRSPRMRKKTVAEDESSTVSDSSSHTDTERLITEQYKEGKELLQRCDKLLNSIAEITELQQPSPVSVLDSSFYKDDSSCSPSPVMKRCIEYKDLGAESEDETWSATLYCNEAKSEDCDFIYISEVLRASNYLPEDNDMFLLLEQQQYLKGNDTSKVSTLQRRLIFDTIHEILNRKRRLPPWKLENAPSLKFIWSEIRRIQERDESEDLFEVICGVLRKDMSVENEWGECNVEIGDVVLDIERFIFKDLIEETIRDLALCNKVPRNKVSMLRRKLEF 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03796 656 Pfam Domain of unknown function (DUF4378) 498 631 IPR025486 -
Trre14g03796 656 MobiDBLite consensus disorder prediction 143 160 - -
Trre14g03796 656 MobiDBLite consensus disorder prediction 333 364 - -
Trre14g03796 656 MobiDBLite consensus disorder prediction 139 168 - -
Trre14g03796 656 MobiDBLite consensus disorder prediction 306 410 - -
Trre14g03796 656 PANTHER LONGIFOLIA PROTEIN 7 77 IPR033334 GO:0051513
Trre14g03796 656 MobiDBLite consensus disorder prediction 367 395 - -
Trre14g03796 656 MobiDBLite consensus disorder prediction 40 82 - -
Trre14g03796 656 MobiDBLite consensus disorder prediction 41 75 - -
Trre14g03796 656 MobiDBLite consensus disorder prediction 306 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03796 Trre-Chr14 46659671 46670932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03796 92 656 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 39.033 3.21e-101 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03796 - - lja:Lj1g3v4449210.1 680.633