Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03795 ATGAGTTTGGAAAAGAATCCGTGTGTATTTTTCGATGTATCAATTGATGGGGATCCCGTGGAAAGAATTGTTATTGAGCTTTTTTCTAGCGTAGTTCCTAAGACAGCTGACAATTTTCGGGCCCTATGTACAGGTGAGAAGGGGATTGGAGAAGCAACTGGGAAACCTTTACATTATAAAGGAACATGTTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCAGATGAAAATTTCAAACTAAAACATGATGGACCTGGTGTCCTTTCTATGGCTAATAGTGGTCCTAACACCAATGGATCTCAGTTTTTTATTATATTCAAGCGCCAGCCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTACCAAGGGAATAGATATTCTGAAGAAAATGGAGCAGTTGGGAACGGCGGATGGGAAACCTACCCAGCCAATTAAAATTGTTGATTGTGGTGAAGTTTCTAAAGCAAAAACTCAGCATACTGTTGAGAAGGAGAAAGGGAAAAGTAGAAAGTCAGCAAAATCCTTAACTTCTGATGATAGTTCTGACGCTGGCAAAAAGTTAAGTAGAAAAAGAAAAACATCTTCCAAAGACAGGAGGAAGAGAAGGAGGAAATATTCATCATCTGATAGTGACAGTGATAGTTATTCCTCAGATTCGGAATCAGATTCTGCTTCAGATTCTGAATCAGATTCACCTTATTCTGATTCAAGTTCTTCTAGCTATGGGAAACACCAGAAGAGGAAGAGAAGTAAACGCAGGCATGGGAAGAAGAGAAGTATTGGACGGAAGCAGAGAAGAAGTCAGCACAGTCGTAGAAGATCAAAACACAAGTCCAAAAGGAGTTCTGAAGGTTCGAGTGATACAGAAAGTGACAGTTCTAGTGCTAGTGACAGTAGTTCTGGTGATAAGAAAGCTGATCGTCATGTCTCTGGTCGTAAAAAACAAGCTGACAACAAAACTAAAAAAAACCTAGGCACAGAAAAGCAATCTTCTAGCCTTCCCTTACAAAGTCCAACTAGTCCAGAACTAGAGGTGGATCCCAAGGTTAGAACGACTGTGGAAAAGCAATCACACGAAGAAGGTGAATTGTCTCCAGAAAATGGTGAATTTCTGAATAACGGGCATGAGACTCAAGCTGAATTTATTAAACCTGCTGATCAACGGGCTCATTCAGACGATTCAAATCACAATAGAGATACGAGTCCTGGAAGAAGTCCTGCTGCTAGGAGTCCTACCAAGAGTTCTAGAGAGCTGAGCCAAGGACGTGCTCTATTGGCTAGTCCTGACCATAAAGCATCTGAACCTGCTGCCTCCAAACATGGCCGGGGCATTTCAAAAAGCCCTTCGCCAAATGGTAAGCGCGTTAAAAAAGGACGAGGCTTTACTGAGCGATTTGCCTTTGTACGCAGATACCGTACTCCATCTCCAGAGAAGTCTCCTCGTTCATATCGTTATGGGGATAGAAATATTAGAAGGAACTTTGATAGAAATACAAGCCACAGAGGTTATTCTGAGCGCTCGCCACCACGACGTTTTCGCAGCCCACCAAGGGGCAGCCGTCCCAGATACCAAAGCAGAAGAAGTCGGAGCAGAAGTATCTCCCGCAGTCCAGTACGCGGCCGTTATAGAGACAATGGCCGTGGCCGGAGTCCAATACGCAGTGTTAGCCCAGAAGAAAGGCGGCCTCCCATAAGTGACAGATTAAAATCCCGACTTGGTGCACGAGGTAGTCAACAATCTCCAGACAGAGCGAGGTCAAAGTCAAATTCGAGAAGCAAGGGCTCTTCTCATTCCAGATCCCCTGATGCTATACTCCCAAGACGTTATGATAAAAGGGCTTCAATATCTCGTAGCAGGTCCAGGTCAAGCTCATCTGGACACAAGGGTTTGGTTTCCTATGGAGATGCTAGTCCCGATTCAGGGGCTAGGTAG 2001 0.4368 MSLEKNPCVFFDVSIDGDPVERIVIELFSSVVPKTADNFRALCTGEKGIGEATGKPLHYKGTCFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLKHDGPGVLSMANSGPNTNGSQFFIIFKRQPHLDGKHVVFGKVTKGIDILKKMEQLGTADGKPTQPIKIVDCGEVSKAKTQHTVEKEKGKSRKSAKSLTSDDSSDAGKKLSRKRKTSSKDRRKRRRKYSSSDSDSDSYSSDSESDSASDSESDSPYSDSSSSSYGKHQKRKRSKRRHGKKRSIGRKQRRSQHSRRRSKHKSKRSSEGSSDTESDSSSASDSSSGDKKADRHVSGRKKQADNKTKKNLGTEKQSSSLPLQSPTSPELEVDPKVRTTVEKQSHEEGELSPENGEFLNNGHETQAEFIKPADQRAHSDDSNHNRDTSPGRSPAARSPTKSSRELSQGRALLASPDHKASEPAASKHGRGISKSPSPNGKRVKKGRGFTERFAFVRRYRTPSPEKSPRSYRYGDRNIRRNFDRNTSHRGYSERSPPRRFRSPPRGSRPRYQSRRSRSRSISRSPVRGRYRDNGRGRSPIRSVSPEERRPPISDRLKSRLGARGSQQSPDRARSKSNSRSKGSSHSRSPDAILPRRYDKRASISRSRSRSSSSGHKGLVSYGDASPDSGAR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03795 666 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Trre14g03795 666 CDD cyclophilin_ABH_like 7 173 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 423 444 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 266 302 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 370 388 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 560 591 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 177 666 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 348 362 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 404 422 - -
Trre14g03795 666 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 173 IPR002130 GO:0000413|GO:0003755
Trre14g03795 666 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Trre14g03795 666 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 175 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 595 622 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 212 226 - -
Trre14g03795 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Trre14g03795 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Trre14g03795 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Trre14g03795 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Trre14g03795 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Trre14g03795 666 MobiDBLite consensus disorder prediction 626 640 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 479 535 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 178 211 - -
Trre14g03795 666 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Trre14g03795 666 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Trre14g03795 666 MobiDBLite consensus disorder prediction 233 263 - -
Trre14g03795 666 Gene3D - 1 182 IPR029000 -
Trre14g03795 666 MobiDBLite consensus disorder prediction 536 559 - -
Trre14g03795 666 MobiDBLite consensus disorder prediction 323 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03795 Trre-Chr14 46648052 46652715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03795 25 171 U-box Gene Family AT5G67530 47.651 2.40e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03795 K09566 - gmx:100807327 749.969