Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03790 ATGGTGAAATCACCGTCACAGACACCACCGACGTCGCCACCACCATCGCCACCTTCATCGCCGCAACCAAAGCCTCCGCAATTTCGTCACTCACAATCGGCCACCGATATTGTTCGTTTGATGACTAAGGACCTCCGTCGTCCTATCTCGCCGTTGCATTCTTCGTACCTGGAACTTTCAGAAAAATCACCACCGGCAGTTACTGTTCATCCACCACCGCCGCAATCACTTCTTCATCCCTCACTATCGGCCACCGATATCGTTGATAAGATGACTCAGGAACTTTCAGAAGAATCACCACCGGCAGTTAATGTTCATCCACCACCACCATCGCCACCTTCGGGACAACTACCACCGCCAGAAAATTGGTCTCCAGAAGAAGAAAGGTTGTTTCATCAAGGGGCAAAGGCATGTGGAAAAGATTGGGAGCTCATATCAGCAGATTATGTTAAGACGAAAACTCCTATTCAAATATGTGAGTATGCTAAGAAGATTCAGTTGTGTGAAAAGAAAAACAAAACAACATGA 528 0.4716 MVKSPSQTPPTSPPPSPPSSPQPKPPQFRHSQSATDIVRLMTKDLRRPISPLHSSYLELSEKSPPAVTVHPPPPQSLLHPSLSATDIVDKMTQELSEESPPAVNVHPPPPSPPSGQLPPPENWSPEEERLFHQGAKACGKDWELISADYVKTKTPIQICEYAKKIQLCEKKNKTT 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03790 175 SMART sant 119 168 IPR001005 -
Trre14g03790 175 Pfam Myb-like DNA-binding domain 121 163 IPR001005 -
Trre14g03790 175 ProSiteProfiles SANT domain profile. 118 170 IPR017884 -
Trre14g03790 175 MobiDBLite consensus disorder prediction 102 120 - -
Trre14g03790 175 MobiDBLite consensus disorder prediction 56 128 - -
Trre14g03790 175 CDD SANT 122 165 IPR001005 -
Trre14g03790 175 Gene3D - 122 168 - -
Trre14g03790 175 SUPERFAMILY Homeodomain-like 121 163 IPR009057 -
Trre14g03790 175 MobiDBLite consensus disorder prediction 7 25 - -
Trre14g03790 175 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03790 Trre-Chr14 46552659 46555422 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre14g03790 Myb_DNA-binding 3.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03790 - - aip:110265393 51.6026