Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre14g03784 | ATGGTTAAAGAAATATGTTTTCATATTTTGGTGGGCTTGTTGGATTATTTGCACCGCGAGCTTTCTGTCATACACACTGACTTGAAGCCAGAGAATGTGTTGCTTCATTCACTGATAGATCCGTGTAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAGGATAAGGCTTTGTCTAATAATGGCACTATCCAAAACAGTAAAATTGGGAATGGAGATTCAACAAAGAACCAGAAGAAGAAAATGCAGGGAAACGCTAAGAGGATGGCTCAAGGCTGTATTGAGAAGGAAAGTCCAGAGGAAGCTGCGGAGGACTTTAAAGAACCCGAGCACGAATATCGTAAAAATCATGTGAAATCAAGTGTAGAATCTTCTGAAAATAAACCCAAAAGTTCTTTCAGTGAAGGTGAATCAACACAAGCTTTTGAAAAGGATGTTGCACAAGGAAATCATGGTCATATGAAAGGTAGCCGTTCCATGAGAAAGAAGCTACTGGCAGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGTAATGCCTGTTGGACTTATAAACAGTTCACTGATGATATTCAGACAAGGCAATATAGATGTCCTGAGGTTCTTCTTGGATCTAAATACTCTATTCCAGCAGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACCGGAGATGTTCTTTTTGATCCTCATAGTGGAGACAACTATGATATGGATGAGGCAAGTTCCCCTATTTTTTTGCTAAGAAACTTCTGGTTTGCTTTATTTTATGCTATTTTTATTTGA | 804 | 0.393 | MVKEICFHILVGLLDYLHRELSVIHTDLKPENVLLHSLIDPCKDPRKSGAPLILPNTKDKALSNNGTIQNSKIGNGDSTKNQKKKMQGNAKRMAQGCIEKESPEEAAEDFKEPEHEYRKNHVKSSVESSENKPKSSFSEGESTQAFEKDVAQGNHGHMKGSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTDDIQTRQYRCPEVLLGSKYSIPADMWSFACICFELATGDVLFDPHSGDNYDMDEASSPIFLLRNFWFALFYAIFI | 267 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre14g03784 | 267 | Gene3D | Transferase(Phosphotransferase) domain 1 | 171 | 246 | - | - | |
Trre14g03784 | 267 | PANTHER | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 247 | - | - | |
Trre14g03784 | 267 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 44 | - | - | |
Trre14g03784 | 267 | MobiDBLite | consensus disorder prediction | 58 | 83 | - | - | |
Trre14g03784 | 267 | MobiDBLite | consensus disorder prediction | 97 | 128 | - | - | |
Trre14g03784 | 267 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 23 | 35 | IPR008271 | GO:0004672|GO:0006468 | |
Trre14g03784 | 267 | MobiDBLite | consensus disorder prediction | 53 | 145 | - | - | |
Trre14g03784 | 267 | SMART | serkin_6 | 67 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre14g03784 | 267 | MobiDBLite | consensus disorder prediction | 129 | 145 | - | - | |
Trre14g03784 | 267 | ProSiteProfiles | Protein kinase domain profile. | 1 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre14g03784 | 267 | Pfam | Protein kinase domain | 173 | 241 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre14g03784 | 267 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 242 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre14g03784 | Trre-Chr14 | 46499433 | 46500236 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre14g03784 | 1 | 246 | EF-hand Containing Proteins | AT5G22840 | 58.233 | 1.07e-82 | 256 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_SRPK | Trre14g03784 | Pkinase | 2.8e-13 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre14g03784 | K08832 | - | gmx:100790060 | 385.956 |