Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03784 ATGGTTAAAGAAATATGTTTTCATATTTTGGTGGGCTTGTTGGATTATTTGCACCGCGAGCTTTCTGTCATACACACTGACTTGAAGCCAGAGAATGTGTTGCTTCATTCACTGATAGATCCGTGTAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAGGATAAGGCTTTGTCTAATAATGGCACTATCCAAAACAGTAAAATTGGGAATGGAGATTCAACAAAGAACCAGAAGAAGAAAATGCAGGGAAACGCTAAGAGGATGGCTCAAGGCTGTATTGAGAAGGAAAGTCCAGAGGAAGCTGCGGAGGACTTTAAAGAACCCGAGCACGAATATCGTAAAAATCATGTGAAATCAAGTGTAGAATCTTCTGAAAATAAACCCAAAAGTTCTTTCAGTGAAGGTGAATCAACACAAGCTTTTGAAAAGGATGTTGCACAAGGAAATCATGGTCATATGAAAGGTAGCCGTTCCATGAGAAAGAAGCTACTGGCAGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGTAATGCCTGTTGGACTTATAAACAGTTCACTGATGATATTCAGACAAGGCAATATAGATGTCCTGAGGTTCTTCTTGGATCTAAATACTCTATTCCAGCAGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACCGGAGATGTTCTTTTTGATCCTCATAGTGGAGACAACTATGATATGGATGAGGCAAGTTCCCCTATTTTTTTGCTAAGAAACTTCTGGTTTGCTTTATTTTATGCTATTTTTATTTGA 804 0.393 MVKEICFHILVGLLDYLHRELSVIHTDLKPENVLLHSLIDPCKDPRKSGAPLILPNTKDKALSNNGTIQNSKIGNGDSTKNQKKKMQGNAKRMAQGCIEKESPEEAAEDFKEPEHEYRKNHVKSSVESSENKPKSSFSEGESTQAFEKDVAQGNHGHMKGSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTDDIQTRQYRCPEVLLGSKYSIPADMWSFACICFELATGDVLFDPHSGDNYDMDEASSPIFLLRNFWFALFYAIFI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03784 267 Gene3D Transferase(Phosphotransferase) domain 1 171 246 - -
Trre14g03784 267 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 1 247 - -
Trre14g03784 267 Gene3D Transferase(Phosphotransferase) domain 1 1 44 - -
Trre14g03784 267 MobiDBLite consensus disorder prediction 58 83 - -
Trre14g03784 267 MobiDBLite consensus disorder prediction 97 128 - -
Trre14g03784 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 23 35 IPR008271 GO:0004672|GO:0006468
Trre14g03784 267 MobiDBLite consensus disorder prediction 53 145 - -
Trre14g03784 267 SMART serkin_6 67 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03784 267 MobiDBLite consensus disorder prediction 129 145 - -
Trre14g03784 267 ProSiteProfiles Protein kinase domain profile. 1 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03784 267 Pfam Protein kinase domain 173 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03784 267 SUPERFAMILY Protein kinase-like (PK-like) 3 242 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03784 Trre-Chr14 46499433 46500236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03784 1 246 EF-hand Containing Proteins AT5G22840 58.233 1.07e-82 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Trre14g03784 Pkinase 2.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03784 K08832 - gmx:100790060 385.956