Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03776 ATGGTTAATGGTGATTATGCTTATCCTTCAACTATGAATGTTGAGAGTGTGCACCGTGTGGCAATACCACCACCACAACCATTTTTAAAGTCACTTAAGTATTCTATGAAAGAAACATTTTTACCAGATGACCCATTGAGAAAGTTCAAGAACCAACCAGCTTCAAAGAAATTTGTTCTTGCTCTTCAACATTTTTTTCCAATTTTGGAGTGGGCCCCACGATACACAATTCAGTTCTTGAAATCTGACATAATTGCTGGGATTACCATTGCTAGTTTGGCTATTCCTCAAGGGATTAGTTATGCTAAGCTTGCCAATCTTCCTCCAATTCTTGGACTTTATTCAAGCTTTATACCACCATTGATTTATGCAATGATGGGAAGCTCGAGAGATTTGGCAGTGGGAACTGTGGCAGTTGGATCACTTCTAATGGCTTCCATGTTGGGTCGTGAAGTTAATCCAAATGAGAATCCAAAGCTTTTTCTCCACCTTGCTTTCACTGCTACATTCTTTGCTGGAGCTCTACAATTATCACTCGGCCTCTTTAGGTTGGGGTTTATTGTGGATTTTCTATCACATGCAGCAATTGTAGGATTCATGGGTGGAGCAGCAACAGTGGTTTGTCTTCAACAACTAAAATCAATATTAGGACTTGAACATTTTACACATGAAGCTGATATTGTGTCAGTAATGAAATCTGTTTTCACACAAACTCGTGAGTGGAGGTGGGAAAGTGCAGTGTTGGGATGTTGCTTTATTTTTTTCCTCCTCGTCACAAGATACATTAGCAAACAACGACCGAAGTTCTTTTGGGTGTCAGCAATGACACCACTGTCGTCGGTTATATTGGGAAGTCTGCTAGTTTATTTCACTCACGCTGAGAAGCATGGTGTTCAAGTGATAGGAGAATTGAAGAAGGGGCTTAATCCACCTTCAGCAACAGATTTGGTGTTTGTGTCACCATATATGGGCACAGCCATCAAAACTGGACTCATTATTGGCATAATAGCTCTTGCAGAAGGAATAGCAGTAGGAAGAAGCTTTGCAATGTTTAAAAATTACCATATTGATGGAAATAAAGAAATGATAGCTTTTGGTAGCATGAATATTTTGGGTTCATTAACCTCTTGTTACCTCACAACAGGACCGTTTTCACGTTCGGCCGTGAACTACAATGCCGGGTGCAAAACTGCGGCATCAAACATTGTAATGTCAATAGCAGTGATGTTGACATTATTATTCCTAACACCTTTGTTCCATTACACTCCTTTAGTGGTACTATCAGCAATTATTGTGTCTGCAATGCTTGGACTTATAGATTATCAAGCAGCAATTCATTTGTGGAAAATTGACAAATTTGATTTTTTAGTATGCTTCAGTGCATATATTGGAGTTGTGTTTGGCAGTGTTGAAATTGGCTTAGTAATAGCACTTGCATTATCTGTACTTAGAGTACTTTTATTTGTTGCAAGGCCTAGAACATTTGTTTTAGGAAACATTCCAAATTCTTCAGCATATAGAAATGTTGAACATTATCCAAGTGCAAATCATGTTCCTGGAATACTAATTCTTGAAATTGATGCACCAATTTTTTTTGCTAATGCAAGCTATTTAAGAGAGAGGATCACAAGGTGGATTGATGAAGAGGAAGAGAGACTTGAAGGTGCAGGGAAGACCAGTTTGGAGTATGTTATTGTGGATATGACCGCTGTTGCAAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTTCAAGAAGTCAATAGACCGAAAAGGGCTACAACTCGTTTTGGTCAACCCCGGAAGCGAGGTGACGAAGAAACTTAACAAATCAAAGTTCCTTGATGAAATAGGACATAAATGGGTTTATGTGACAGTTGAAGAAGCTGTTGGAGTATGCAGCTTCATGCTTCATACACACAAGGCTAATAATCTCAAGAAAGATGAACCAGAAGGTTTGAACAGTGTGTGA 1974 0.3891 MVNGDYAYPSTMNVESVHRVAIPPPQPFLKSLKYSMKETFLPDDPLRKFKNQPASKKFVLALQHFFPILEWAPRYTIQFLKSDIIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGREVNPNENPKLFLHLAFTATFFAGALQLSLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHEADIVSVMKSVFTQTREWRWESAVLGCCFIFFLLVTRYISKQRPKFFWVSAMTPLSSVILGSLLVYFTHAEKHGVQVIGELKKGLNPPSATDLVFVSPYMGTAIKTGLIIGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGSMNILGSLTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFSAYIGVVFGSVEIGLVIALALSVLRVLLFVARPRTFVLGNIPNSSAYRNVEHYPSANHVPGILILEIDAPIFFANASYLRERITRWIDEEEERLEGAGKTSLEYVIVDMTAVANIDTSGISMLEEFKKSIDRKGLQLVLVNPGSEVTKKLNKSKFLDEIGHKWVYVTVEEAVGVCSFMLHTHKANNLKKDEPEGLNSV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03776 657 Gene3D STAS domain 491 636 IPR036513 -
Trre14g03776 657 FunFam Sulfate transporter 31 491 637 - -
Trre14g03776 657 Pfam Sulfate permease family 80 460 IPR011547 GO:0016020
Trre14g03776 657 Pfam STAS domain 512 630 IPR002645 -
Trre14g03776 657 NCBIfam sulfate permease 67 630 IPR001902 GO:0016020|GO:0055085
Trre14g03776 657 SUPERFAMILY SpoIIaa-like 514 634 IPR036513 -
Trre14g03776 657 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Trre14g03776 657 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Trre14g03776 657 PANTHER SULFATE TRANSPORTER 30 636 IPR001902 GO:0016020|GO:0055085
Trre14g03776 657 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03776 Trre-Chr14 46415422 46423318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03776 10 645 Inorganic Solute Cotransporters AT4G02700 67.975 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03776 K17471 - gmx:100791091 1115.52