Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03694 ATGAGCTATCAAATGAATGGTGAAAATGCATGCAGAGATTTGAAAAGAAAGCTCCCTCAGATGGATCGAGGGCATGAGCCGAGATCTTATAATACCAATTCTACACCTTATGATAGAAATGCACTTCCTCCTGGTTGGTTAGACTGCCCAGCACATGGGCAAGAACTAGGGTGCATAATCCCTTCAAAGGTTCCACTAGGAGAATCCTTCAATGATTACATTCCAAATAAAAGATATACTCCCAAGCAAGCAATTCATCAACAGAGAGCTTTAGGTAGAGAACTTGGTTTAGTGATTGATCTGACAAATACTACCCGTTACTATCAATTATCAGATTGGAAAAAAGAAGGGATTAGCCATGTAAAGATAAGATGCAAAGGAAGAGATTCTGTACCTGATGATGAATCTGTACAAAAGTTTTGCAATGAGGTTCTGGATTTTTGCTCTCGAAGACCAAACACAAAGAAATATATACTTGCACACTGCACTCATGGGCATAATCGTACAGGTTATATGATTGTTAGTTTTCTTGTGCGTACAGAATCAATTTCTGTCACTGAGGCGATAAATAAATTTGCTCAGGCACGTCCCCCAGGAATTTACAAGCAGGATTATATTGACGCCCTGTACATGTTGTTTAATGAAAAGAAGCCTGAAAATCTTGTTTGTCCACAAACTCCAGAATGGAAGAGCCTCCCTGACCCTGACTATCATGGCGTGTCTGTGTCAGCTACAGACAATTATACAGACATTTTGAAGCAGGAGAATATTGTGAGGAATGAAGTAATGACAAATGATGATGTTTTGGGAGATCCTATTCCTTCAAACCAGCTACGTACAATGCAAGAAGTTTGTTATCAACTGCTCAAGATGGGCAAAGGGGGAAAAGGCTTTCCCGGATCACACCCTGTTTCTCTGAACAGGGAAAATTTGCAACTCTTAAGACAGAGGTATTACTATGCCACATGGAAAGCTGATGGGACACGGTATATGATGTTAATCACTGGGGATGGATGTTATTTGATTGACAGAAAATTTCTTTTCCAAAGGATCTGTATGCGGTTTCCTTGCAGATACTCAAATGGGGGTACACCTGAGAGGAATCACCACTACACATTACTTGATGGGGAGATGATTATTGACACAGATCCACATACACATAAGCAAGAAAGAAGATACCTCATTTATGATTTGATAGCAATCAATCAAGTCTCTCTGACAGAGATCCCATTCTATGAAAGGTGGAAATTACTGGAGAAAGAAGTAATTGAACCCCGGAACATGGAACGAGAAGCCCTTTCCAAGAGTATAAGTCCTTATTATAGATATGACTTGGAACCATTTGGTGTGAGGAGGAAGGGTTTTTGGTTACTATCTACTGTGTCAAAGCTCCTTCATAAATTCATTCCACAACTCTCACATTCATCAGATGGTCTTGTATTCCAGGGTTGGGATGATCCGTATGTCCCTCGCACACATGAAGGTCTTCTGAAGTGGAAATACCCGGAGATGAACTCTGTTGATTTTCACTTTGAGGTGGGAGCCGGTGATCGACCCCTGCTTTTTCTGTTTGAACGCGGAAAGAGGAAATTAATGGAAGGGAATGCTGTTATTTTTAAAGATGCAACGGATATTTCTTCCTATTCAGGAAGGATTATTGAGTGCTACTGGGATGCTGCGGAGCATCACTGGGTCTGTATGCGGATAAGAGCCGATAAAGCAACTCCAAATGATATCAATACTTATAGAAAGGTAATGCGAAGCATAAAGGATAATATCACTGAAGAGGTCCTGTTGAATGAGATTAGTGAGATCATTCGGCTACCCTTGTATGCAGACAGAATACAAAGGGATATCAAGGCTCACCAGCATATGGTCTCTTCACGACGCAAGTGA 1896 0.4082 MSYQMNGENACRDLKRKLPQMDRGHEPRSYNTNSTPYDRNALPPGWLDCPAHGQELGCIIPSKVPLGESFNDYIPNKRYTPKQAIHQQRALGRELGLVIDLTNTTRYYQLSDWKKEGISHVKIRCKGRDSVPDDESVQKFCNEVLDFCSRRPNTKKYILAHCTHGHNRTGYMIVSFLVRTESISVTEAINKFAQARPPGIYKQDYIDALYMLFNEKKPENLVCPQTPEWKSLPDPDYHGVSVSATDNYTDILKQENIVRNEVMTNDDVLGDPIPSNQLRTMQEVCYQLLKMGKGGKGFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITGDGCYLIDRKFLFQRICMRFPCRYSNGGTPERNHHYTLLDGEMIIDTDPHTHKQERRYLIYDLIAINQVSLTEIPFYERWKLLEKEVIEPRNMEREALSKSISPYYRYDLEPFGVRRKGFWLLSTVSKLLHKFIPQLSHSSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFHFEVGAGDRPLLFLFERGKRKLMEGNAVIFKDATDISSYSGRIIECYWDAAEHHWVCMRIRADKATPNDINTYRKVMRSIKDNITEEVLLNEISEIIRLPLYADRIQRDIKAHQHMVSSRRK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03694 631 SMART dsp_5 75 215 IPR020422 GO:0006470|GO:0008138
Trre14g03694 631 Pfam mRNA capping enzyme, C-terminal domain 536 599 IPR013846 -
Trre14g03694 631 FunFam mRNA capping enzyme family protein 499 608 - -
Trre14g03694 631 FunFam mRNA capping enzyme, putative 264 498 - -
Trre14g03694 631 MobiDBLite consensus disorder prediction 15 37 - -
Trre14g03694 631 Gene3D - 538 608 IPR012340 -
Trre14g03694 631 ProSiteProfiles Dual specificity protein phosphatase domain profile. 69 219 IPR020422 GO:0006470|GO:0008138
Trre14g03694 631 CDD Adenylation_mRNA_capping 276 501 IPR001339 GO:0004484|GO:0005524|GO:0006370
Trre14g03694 631 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 138 207 IPR000387 GO:0016311|GO:0016791
Trre14g03694 631 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 291 501 - -
Trre14g03694 631 FunFam mRNA capping enzyme family protein 38 250 - -
Trre14g03694 631 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 42 230 IPR029021 -
Trre14g03694 631 Pfam Dual specificity phosphatase, catalytic domain 94 210 IPR000340 GO:0008138|GO:0016311
Trre14g03694 631 CDD RNA_5'-triphosphatase 45 211 - -
Trre14g03694 631 SUPERFAMILY Nucleic acid-binding proteins 503 616 IPR012340 -
Trre14g03694 631 PANTHER MRNA-CAPPING ENZYME 37 613 - -
Trre14g03694 631 Pfam mRNA capping enzyme, catalytic domain 302 500 IPR001339 GO:0004484|GO:0005524|GO:0006370
Trre14g03694 631 Gene3D DNA ligase/mRNA capping enzyme 255 500 - -
Trre14g03694 631 PIRSF mRNA_capping_HCE 28 631 IPR017074 GO:0004484|GO:0006370|GO:0140818
Trre14g03694 631 Gene3D Protein tyrosine phosphatase superfamily 17 235 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03694 Trre-Chr14 45648908 45657580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03694 31 621 Protein tyrosine phosphatase (PTP) family AT3G09100 62.292 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03694 K13917 - gmx:100793183 1116.68