Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03679 ATGCATATATTCAAAATAAGGCAGTCCATTGATCTGTACGGTAGTGTGTGCCATCGCAAAATATTGGATTTCTTGGCACAATCATTGACAAGATTAGGCAGATCTTTTCTTGGTTCGACATTGACAAGGAGGCACACTGCTGAAATTATACCGCCTATCAAAAAGCCTCTGATACAACCGACAGTGGACGAAGAGCAGCAGCAGGATAGCTCTCAAACATTGCTTCCTCCCCTCCCATCTAGGAAGTCTTCAATTAGGAAATCTTCAAAGATTTCTCATGAAGTTCATATTCCTGGCCAATGCTCTTTCGGACAAGTTTTTCCTCTCTCTTTTTACAACAATGTATCTATGATGCCCTTTGTGGTGTTGGAATCCTTTCAACCACCTTATGCTCTTAATGAAAGTGGATGGGCTGCACTTGGAATCTTGCTGATATTTGCAGCATTTTCCTTTTATACTGGATTGCTGCTGTGGTATTGCTTCGATAGCGAACCTGGTCTGAAAACCTATCCCGGCATTGGCCAAGCAGCTTTTGATACTCTTGGACGTGTCGCCATTTCAATAATTTTATACATGGAATTATATAGCATTCAATACATCATTCTAGAGAGCGATAATCTAACAGTTTGA 630 0.4079 MHIFKIRQSIDLYGSVCHRKILDFLAQSLTRLGRSFLGSTLTRRHTAEIIPPIKKPLIQPTVDEEQQQDSSQTLLPPLPSRKSSIRKSSKISHEVHIPGQCSFGQVFPLSFYNNVSMMPFVVLESFQPPYALNESGWAALGILLIFAAFSFYTGLLLWYCFDSEPGLKTYPGIGQAAFDTLGRVAISIILYMELYSIQYIILESDNLTV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03679 209 MobiDBLite consensus disorder prediction 61 83 - -
Trre14g03679 209 PANTHER OS05G0424000 PROTEIN-RELATED 127 208 - -
Trre14g03679 209 Pfam Transmembrane amino acid transporter protein 129 207 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03679 Trre-Chr14 45488317 45489503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03679 7 208 Amino Acid or Auxin Permease AAAP Family AT2G39130 49.048 4.76e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03679 K15015 - gmx:100798108 194.126