Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03678 ATGAAGTTCACTACCAATCCAAATATGCATATATTCAAAATAAGGCAGTCCATTGATCTGTACGGTAGTGTGTGCCATCGCAAAATATTGGATTTCTTGGCACAATCATTGACAAGATTAGGCAGATCTTTTCTTGGTTCGACATTGACAAGGAGGCACACTGCTGAAATTATACCGCCTATCAAAAAGCCTCTGATACAACCGACAGTGGACGAAGAGCAGCAGCAGGATAGCTCTCAAACATTGCTTCCTCCCCTCCCATCTAGGAAGTCTTCAATTAGGAAATCTTCAAAGATTTCTCATGAAGTTCATATTCCTGGCCAATGCTCTTTCGGACAAGTTTTTCCTCTCTCTTTTTACAACAATGTATCTATGATGCCCTTTGTGGTGTTGGAATCCTTTCAACCACCTTATGCTCTTAATGAAAGTGGATGGGCTGCACTTGGAATCTTGCTGATATTTGCAGCATTTTCCTTTTATACTGGATTGCTGCTGTGGTATTGCTTCGATAGCGAACCTGGTCTGAAAACCTATCCCGGCATTGGCCAAGCAGCTTTTGATACTCTTGGACGTGTCGCCATTTCAATAATTTTATACATGGAATTATATAGCATTCAATACATCATTCTAGAGAGCGATAATCTAACAGTTTGA 654 0.4052 MKFTTNPNMHIFKIRQSIDLYGSVCHRKILDFLAQSLTRLGRSFLGSTLTRRHTAEIIPPIKKPLIQPTVDEEQQQDSSQTLLPPLPSRKSSIRKSSKISHEVHIPGQCSFGQVFPLSFYNNVSMMPFVVLESFQPPYALNESGWAALGILLIFAAFSFYTGLLLWYCFDSEPGLKTYPGIGQAAFDTLGRVAISIILYMELYSIQYIILESDNLTV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03678 217 PANTHER OS05G0424000 PROTEIN-RELATED 135 216 - -
Trre14g03678 217 MobiDBLite consensus disorder prediction 69 91 - -
Trre14g03678 217 Pfam Transmembrane amino acid transporter protein 137 215 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03678 Trre-Chr14 45488293 45489503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03678 15 216 Amino Acid or Auxin Permease AAAP Family AT2G39130 49.048 5.45e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03678 K15015 - gmx:100798108 194.126