Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03627 ATGAGTGGTAAGCGCTTGGACCACAAGTGGGATCAGAGCAAGTGTTCTTCAAGAACCAGTTTTTCTGCAGTGTGCTGTGACAAAAGCAAACGACCTAAACTTATGAGGTGTTGTGAAGTTAGAGGTGTCATGTTGAGCATATCCGGAGTTTACAAAAGACATAAAGATGGCACCCCAATTAGTTCAGAACCGGAGCGTCAACATGTGATGCAAGGAGCAGTGGAGAGAAGATCATGCGTGGGTGTTAGGCTAGAGTTATCCACGGAAGACAGGCAAGGTTTGCTTACTGGATTTTTTATAGACTCGGGTGATGGTGTCACTCATGTGTTTCCAGTTGTTAATGGCTATTCATTCCCTCATTTGACGAAACGGATGAATGTAGCTGCCTATCTTGTTGATTTGCTATCAAGGAGGGGGCGAGGATATTTTCTTTTCATTTCAGTTGTAATACCAGGGCTTGAGATCACTATCTTTGTTAAGAATTTTACTTTTTCAGATGGAAGGGTCATTAAAGTAGGGACTAAAAGGTTCCAGGCCCGTGAGACTCTTTTCATACCGTTAGGAACGTAA 570 0.4298 MSGKRLDHKWDQSKCSSRTSFSAVCCDKSKRPKLMRCCEVRGVMLSISGVYKRHKDGTPISSEPERQHVMQGAVERRSCVGVRLELSTEDRQGLLTGFFIDSGDGVTHVFPVVNGYSFPHLTKRMNVAAYLVDLLSRRGRGYFLFISVVIPGLEITIFVKNFTFSDGRVIKVGTKRFQARETLFIPLGT 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03627 189 PANTHER ACTIN 93 186 IPR004000 -
Trre14g03627 189 Gene3D - 92 129 - -
Trre14g03627 189 Gene3D Actin; Chain A, domain 4 130 186 - -
Trre14g03627 189 CDD NBD_sugar-kinase_HSP70_actin 93 155 - -
Trre14g03627 189 SUPERFAMILY Actin-like ATPase domain 93 186 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03627 Trre-Chr14 45130272 45137347 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03627 93 186 Cytoskeleton Gene Families AT1G49240 32.787 3.60e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03627 K17260 - cave:132183318 125.946