Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03592 ATGTTGTGTTGCGGAGGCGCGGAAGAAGATACCAGCGGGCCACCTGCAAACCAATACACTGCACCATCAAGAGGGGGTAACTCATATGGCGGTGGCGGAGGAAATGATAGAGGAGAACCAAGGAGCAATATTTCCAAAACTGGTGGTCCACAAAAAGTATTACCAATTGAGATACCCTCTATATCATTGGATGAGTTAAATAGGTTAACAGGTAACTTTGGTACAAAGGCTTTCATTGGTGAAGGTTCCTATGGAAGGGTTTACTATGCAAAATTAAGTGATGGTACTGAAGCTGCAATTAAAAAACTTGATACCAGTTCTGGTTCTGAACCTGAAAACGACGATTTCGCCGCCCAGTTATCAGTTGTTTCAAGACTCAAGCATGACAATTTTGTGGAGTTGACTGGATATTGTCTAGAAGCAGACAACAAAATTTTGGTTTATCAATATGCAAGTTTGGGTTCTTTGCATGATGTGTTACATGGAAGAAAAGGTGTACAAGGTGCTGAACCTGGTCCAGTTTTAAACTGGAATCAGAGAGCGAAAATTGCATTTGGTGCAGCAAAAGGGCTAGAGTTTCTTCATGAAAAGGTTCAACCGTCTATTGTTCATCGCGATGTTCGATCCAGTAATGTCTTGCTGTTTAATGACTATGAGGCCAAGATTGCTGATTTCAGCTTGACAAATCAGTCTTCTGATACCGCAGCTCGCCTACATTCGACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAATATGCTATGACCGGACAGATAAATCAAAAAAGTGATGTTTATAGTTTTGGAGTTGTGCTTTTAGAACTCTTAACCGGAAGAAAGCCGGTAGACCACACAATGCCTAAAGGGCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGAATACCCCCCAAAGGCAATTGCTAAGTTGGCAGCTGTTGCAGCACTATGTGTTCAGTATGAAGCTGATTTCCGACCAAACATGACAATTGTTGTCAAAGCTCTCCAGCCACTTCTCAATGCAAAACCGGCTGGTCCTGAATCTAATGCTTGA 1104 0.4239 MLCCGGAEEDTSGPPANQYTAPSRGGNSYGGGGGNDRGEPRSNISKTGGPQKVLPIEIPSISLDELNRLTGNFGTKAFIGEGSYGRVYYAKLSDGTEAAIKKLDTSSGSEPENDDFAAQLSVVSRLKHDNFVELTGYCLEADNKILVYQYASLGSLHDVLHGRKGVQGAEPGPVLNWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQINQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPESNA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03592 367 SUPERFAMILY Protein kinase-like (PK-like) 52 352 IPR011009 -
Trre14g03592 367 ProSiteProfiles Protein kinase domain profile. 73 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g03592 367 FunFam probable protein kinase At2g41970 46 150 - -
Trre14g03592 367 Gene3D Transferase(Phosphotransferase) domain 1 152 363 - -
Trre14g03592 367 Pfam Protein tyrosine and serine/threonine kinase 77 352 IPR001245 GO:0004672|GO:0006468
Trre14g03592 367 MobiDBLite consensus disorder prediction 1 51 - -
Trre14g03592 367 Gene3D Phosphorylase Kinase; domain 1 41 150 - -
Trre14g03592 367 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 360 - -
Trre14g03592 367 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Trre14g03592 367 SMART tyrkin_6 73 352 IPR020635 GO:0004713|GO:0006468
Trre14g03592 367 ProSitePatterns Tyrosine protein kinases specific active-site signature. 202 214 IPR008266 GO:0004672|GO:0006468
Trre14g03592 367 FunFam PTI1-like tyrosine-protein kinase 3 152 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03592 Trre-Chr14 44818166 44821135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03592 37 359 Receptor kinase-like Gene Family AT3G58690 43.731 1.89e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Trre14g03592 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03592 - - gmx:100812507 656.751