Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g03539 ATGAGGATCCGTAAAAGACAGGCTATTTTCTCTTCTTCTGAGTCTATTTCATCTTTGCATCTCTCAGATCCCCACCAGTTTAACCGGTCACCGGTCATGGTGCAACTCGGTGAAGAACCTACTCATCATGTTCCAGCTGGTTCTAACTTGGATCGTTATCTACCGTCTGATCAAACACTCCCACTGATTGGGAAACTAAACAACGGCCACGATTATCTCTCCGACATCGAGGAAAGTGGGGAACACAAACACCACAACAAGCAAGAAGAACAAGAACAAGAACAAGATCCTTTGGATGGTGATAAAGTTAGAGAGAAAGGCAAAGAGAGTGGAGACTTTGGAGATAACAAAAGTAATCATATCAGTCTTAGCAAAGGAGACATCTTGGTTGTTCCTCAAGTCTTGCCATCATCATCAAGTACTTTTGCTCAAGATGGGAGATGGTGTGAGGGAGAGAAAGCTATTCCTTTGAAGAAAAGGAAAGGAAGGTTAGAGAATGTTGGGATGGAGAGTAACGATGGTACTGGTAAGAAAATGAAGACTAAGATGAAGACGAAGATGAATAAGAATTGTTCTATGGGAAAAGATGATGAAGATGAAGAAAGCGAAACAAAAGTGATCAATATTAAGAAGCGGGCGACAAAAAGGGGAAGTGCATTGATGGAAGGTTCGAGGTGCAGTCGTGTTAACGGAAGAGGATGGAGGTGTTGTCAACAAACACTAGTTGGTTATTCACTTTGTGAGCATCATTTAGGGAAAGGAAGGTTGAGAAGCATGAGTAGTGTTAGAAGTAGATCTAATATTGGATTTTCTACTAATGTTGCACCAAATAATGTTGTTGATCATAGTGTTTCTAATTCTGATCTTGAAAAGAAAATCATGTTTGGAAATGATGTTGTTGATGATGATGAGTTGGACAAATATGATGAGAAGAAACCGGTTGTGATGATTGCAAAGAAGAGAATGAAGCTTGGAATGGTTAAAGCTCGATCCATGAGCAGCTTATTGGGACAGACAGATAACAAGGTTGCTTTAGCTGATGAGAATAACAAGTAA 1056 0.4006 MRIRKRQAIFSSSESISSLHLSDPHQFNRSPVMVQLGEEPTHHVPAGSNLDRYLPSDQTLPLIGKLNNGHDYLSDIEESGEHKHHNKQEEQEQEQDPLDGDKVREKGKESGDFGDNKSNHISLSKGDILVVPQVLPSSSSTFAQDGRWCEGEKAIPLKKRKGRLENVGMESNDGTGKKMKTKMKTKMNKNCSMGKDDEDEESETKVINIKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMSSVRSRSNIGFSTNVAPNNVVDHSVSNSDLEKKIMFGNDVVDDDELDKYDEKKPVVMIAKKRMKLGMVKARSMSSLLGQTDNKVALADENNK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g03539 351 MobiDBLite consensus disorder prediction 8 25 - -
Trre14g03539 351 MobiDBLite consensus disorder prediction 79 121 - -
Trre14g03539 351 PANTHER EXPRESSED PROTEIN-RELATED 135 336 - -
Trre14g03539 351 MobiDBLite consensus disorder prediction 79 115 - -
Trre14g03539 351 ProSiteProfiles WRC domain profile. 220 264 IPR014977 -
Trre14g03539 351 MobiDBLite consensus disorder prediction 1 25 - -
Trre14g03539 351 Pfam WRC 222 262 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g03539 Trre-Chr14 43864755 43866600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g03539 213 268 GRF Transcription Factor Family AT2G36400 36.207 8.83e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g03539 - - tpra:123892600 535.798